DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and zbtb12.2

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001038349.1 Gene:zbtb12.2 / 559081 ZFINID:ZDB-GENE-060503-27 Length:538 Species:Danio rerio


Alignment Length:243 Identity:73/243 - (30%)
Similarity:105/243 - (43%) Gaps:32/243 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 GHY--------PASATYSFTADFRAPAPTGLGALPPLTVGEKESPSPPANSSLAGYYPTGVGNQG 390
            |:|        |.....||.|||.|               :..|....|:.|:...|..|....|
Zfish   309 GNYQEAWRFPTPDEIMGSFGADFGA---------------DYLSNQHLADGSVRVEYRAGEEQGG 358

  Fly   391 YTPPHKSPTSY----QAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEMKPNLCRLCGKTYARPST 451
            ...|...|..:    .|.|.|:.:.|..::..:.::.....||:.....|.:|..||..::....
Zfish   359 EIGPDGGPAHFGVEASAGAEGMGVGAPSNQRGAADESVAVVGSTSCVTGPVVCEQCGLAFSTTQD 423

  Fly   452 LKTH-LRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTG-QKPFRCPICDRRFSQSSSVTTHMRT 514
            |..| |.||   |.|.||.|.|.||.::||..|:..|.| .|...||:|.:.|:|.|::..||..
Zfish   424 LAMHSLSTH---RLYVCPCCGKHFSHSSNLNRHMIVHRGVSKLHSCPLCHKTFTQKSTLCDHMNL 485

  Fly   515 HSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSG 562
            ||||||:.|:.|..||:....|.:||:...|....|..|.:.|.::||
Zfish   486 HSGERPHVCAYCHVSFAHKPALRRHLKEQHGRTTAQNYLEMQRNNESG 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 52/139 (37%)
C2H2 Zn finger 439..459 CDD:275368 6/20 (30%)
C2H2 Zn finger 467..487 CDD:275368 9/19 (47%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 7/19 (37%)
C2H2 Zn finger 551..571 CDD:275368 4/12 (33%)
zbtb12.2NP_001038349.1 BTB_POZ_ZBTB12 6..129 CDD:349512
KREPA <359..>432 CDD:483960 15/72 (21%)
C2H2 Zn finger 411..432 CDD:275368 6/20 (30%)
COG5048 <422..>525 CDD:227381 42/105 (40%)
C2H2 Zn finger 437..457 CDD:275368 9/19 (47%)
C2H2 Zn finger 466..486 CDD:275368 8/19 (42%)
C2H2 Zn finger 494..512 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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