DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gl and MYNN

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001172047.1 Gene:MYNN / 55892 HGNCID:14955 Length:610 Species:Homo sapiens


Alignment Length:414 Identity:117/414 - (28%)
Similarity:172/414 - (41%) Gaps:137/414 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 QASHVGNSLLQSSGGNNIGSNGSAGGVANAASCYYETSAGTAAPPPPPA----AAMYPS-MSVNV 280
            :.|.|...|:|        :|...|.:|..:|   :|.....|...|..    ...||| :..|.
Human   154 EKSEVSTDLIQ--------ANPKQGALAKKSS---QTKKKKKAFNSPKTGQNKTVQYPSDILENA 207

  Fly   281 SMNMTMHHGYGAGDAGGVPM----QCSQMNWTPPSNSTSAAAAAAAVNVLYPPLLSPGHYPASAT 341
            |:.:.:       ||..:|.    |.:|:|.......||..               ...:||.  
Human   208 SVELFL-------DANKLPTPVVEQVAQINDNSELELTSVV---------------ENTFPAQ-- 248

  Fly   342 YSFTADFRAPAPTGLGALPPLTVGEKESPSPPANSSLAGYYPTGVGNQGYTPPHKSPTSYQAAAL 406
                           ..:..:||..|...|.| |.:|..:..:.:.:.      |||  |:|   
Human   249 ---------------DIVHTVTVKRKRGKSQP-NCALKEHSMSNIASV------KSP--YEA--- 286

  Fly   407 GLSLSAFEDEEDSNEDLDG----------------DEGSS---------GGEMKPNLCRLCGKTY 446
                      |:|.|:||.                .|.||         |  :||.:|.||||.:
Human   287 ----------ENSGEELDQRYSKAKPMCNTCGKVFSEASSLRRHMRIHKG--VKPYVCHLCGKAF 339

  Fly   447 ARPSTLKTHLRTHSGERPYRCPDCNKSFSQ-----------------------------AANLTA 482
            .:.:.||||:|||:||:||:|..|:|.|:|                             ::||..
Human   340 TQCNQLKTHVRTHTGEKPYKCELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKI 404

  Fly   483 HVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEK 547
            |.|.|:|:||:.|..|.:||:|:|::|.|:|.|:||:||.|.:|.|:|:.||:|..|.|.|:|||
Human   405 HARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHSRKHTGEK 469

  Fly   548 PYQCKLCLLRFSQSGNLNRHMRVH 571
            ||.|.:|...|..||.||:|.|.|
Human   470 PYICGICGKSFISSGELNKHFRSH 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 10/19 (53%)
zf-C2H2 439..459 CDD:278523 10/19 (53%)
zf-H2C2_2 452..476 CDD:290200 15/23 (65%)
C2H2 Zn finger 467..487 CDD:275368 9/48 (19%)
zf-H2C2_2 479..504 CDD:290200 12/24 (50%)
zf-C2H2_8 492..570 CDD:292531 38/77 (49%)
C2H2 Zn finger 495..515 CDD:275368 9/19 (47%)
zf-H2C2_2 507..531 CDD:290200 11/23 (48%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
zf-H2C2_2 536..560 CDD:290200 12/23 (52%)
C2H2 Zn finger 551..571 CDD:275368 9/19 (47%)
MYNNNP_001172047.1 BTB 14..115 CDD:306997
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..197 6/30 (20%)
Nuclear localization signal. /evidence=ECO:0000255 174..190 3/18 (17%)
Nuclear localization signal. /evidence=ECO:0000255 257..262 1/4 (25%)
C2H2 Zn finger 304..324 CDD:275368 3/19 (16%)
zf-C2H2 304..324 CDD:306579 3/19 (16%)
zf-H2C2_2 316..341 CDD:316026 9/26 (35%)
C2H2 Zn finger 332..352 CDD:275368 10/19 (53%)
zf-H2C2_2 345..369 CDD:316026 15/23 (65%)
SFP1 <354..438 CDD:227516 26/83 (31%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
C2H2 Zn finger 389..409 CDD:275368 4/19 (21%)
C2H2 Zn finger 417..437 CDD:275368 9/19 (47%)
zf-H2C2_2 430..453 CDD:316026 11/22 (50%)
SFP1 <439..522 CDD:227516 29/55 (53%)
C2H2 Zn finger 445..465 CDD:275368 9/19 (47%)
C2H2 Zn finger 473..493 CDD:275368 9/19 (47%)
C2H2 Zn finger 501..522 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..556
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.