DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gl and dati

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001245421.1 Gene:dati / 43789 FlyBaseID:FBgn0262636 Length:1150 Species:Drosophila melanogaster


Alignment Length:652 Identity:144/652 - (22%)
Similarity:217/652 - (33%) Gaps:220/652 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 QAASLSYTVHPHQMLISPNSHNHGQMHSQHQQHQHQQSQVQ-------ASHVGNSLLQSSGGNN- 237
            |.|...|:..|:|..||     |..:|....|...|.:.||       :..|||:...:..|.| 
  Fly    73 QTALHQYSSPPNQQPIS-----HHALHHSVPQENEQLAGVQPEGPAAGSGVVGNNSSMAISGTNS 132

  Fly   238 -IGSNGSAGGV----ANAASCYYETSAGTAAP-----------PPPPAAAMY---PSMSVNVS-- 281
             :||...:..:    :...|...::..||.:|           ....|||::   .:|..|:|  
  Fly   133 TVGSKAESSHIPQQHSEQQSYGSDSFRGTQSPQLSSHHLLFNAAAAAAAAVHLKSTAMQNNLSPI 197

  Fly   282 ----MNMTMHHGYGAGDAGGVPMQCSQMNWTPPSNSTSAAAAAAAVNVLYPPLLSPGHYPASATY 342
                .|...::|.|:.:|     .|.    ..|.....|......::....||:.     |.|..
  Fly   198 GDQVQNNLRNYGQGSLNA-----LCG----IKPKQEMDAKTPLQPLDECPHPLVQ-----AQAQS 248

  Fly   343 SFTADFRAPAP-------------TGLGALPPLTVGEKESPSPPANSSLAGYYPTGVGNQGYTPP 394
            .:..|:...|.             .||||  |.||...::.|...:..|||   ||...|.:...
  Fly   249 QYGGDYYDVADPQAREISEGRALIIGLGA--PSTVSTDDAQSSAPSHQLAG---TGRALQTHQCK 308

  Fly   395 HKSPTSYQAAALGLSLSA--------------------------------FEDEEDSNE-DLDGD 426
            ..||.:..::.||....:                                :.:::.:|| .|...
  Fly   309 PMSPGTVGSSNLGAGRRSAPTTISKTFSQGQQSPQHSTTPSGGSTTPDIKYNNDKMANEIQLQLS 373

  Fly   427 EGSSGGEMKPNLCRLCGKTYARPSTLKTHLR------------TH---------------SGERP 464
            ..||...:.......|..|..|....|:.::            ||               |..:|
  Fly   374 RSSSAAAISERTLEECWSTLQRLFMHKSAMQQIQQQIPRVGLGTHGVTGSANLGGSITPSSDTKP 438

  Fly   465 YRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRC--SSCK 527
            ::|..|.||||....|..|:|.|||:||::|..|||||.|.|.|..|.|.|:|||||:|  ..|.
  Fly   439 HQCQQCMKSFSSNHQLVQHIRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKCHLPDCG 503

  Fly   528 KSFSDSSTLTKHLRIHSGE------KPYQCKLC--------LLRFSQSGNLNRHMRVHGNNNSSN 578
            ::|...|.|.:|||.|..:      :|:.|.:|        .||...|..|..|:.|...:.:..
  Fly   504 RAFIQLSNLQQHLRNHDAQVERAKNRPFHCNICGKGFATESSLRTHTSKELQLHLGVLQQHAALI 568

  Fly   579 GSNGATGV----------------------------GGESST------------GSGVGGGNSLL 603
            |...||..                            ||.:|:            |:|.|..|..:
  Fly   569 GGPNATSCPVCHKLFLGTEALVDHMKHVHKEKSPPPGGSASSQFSELNQIVTGNGNGTGSSNEQI 633

  Fly   604 TXQ----------------------KPRSAGGFQHYHPPHTHHMHH-------QHHAHHHHHAHM 639
            . |                      |.|:|.     ||......|:       :|.|.|..::.:
  Fly   634 ATQCTTESNSHQATVGSSLIDSFLGKRRTAN-----HPCPVCGKHYVNEGSLRKHLACHAENSQL 693

  Fly   640 GN 641
            .|
  Fly   694 TN 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 4/31 (13%)
zf-C2H2 439..459 CDD:278523 4/31 (13%)
zf-H2C2_2 452..476 CDD:290200 10/50 (20%)
C2H2 Zn finger 467..487 CDD:275368 9/19 (47%)
zf-H2C2_2 479..504 CDD:290200 14/24 (58%)
zf-C2H2_8 492..570 CDD:292531 35/93 (38%)
C2H2 Zn finger 495..515 CDD:275368 11/19 (58%)
zf-H2C2_2 507..531 CDD:290200 11/25 (44%)
C2H2 Zn finger 523..543 CDD:275368 8/21 (38%)
zf-H2C2_2 536..560 CDD:290200 10/37 (27%)
C2H2 Zn finger 551..571 CDD:275368 7/27 (26%)
datiNP_001245421.1 COG5048 <429..>511 CDD:227381 36/81 (44%)
C2H2 Zn finger 441..461 CDD:275368 9/19 (47%)
zf-H2C2_2 454..478 CDD:290200 14/23 (61%)
C2H2 Zn finger 469..489 CDD:275368 11/19 (58%)
zf-H2C2_2 481..508 CDD:290200 12/26 (46%)
C2H2 Zn finger 497..519 CDD:275368 8/21 (38%)
C2H2 Zn finger 533..557 CDD:275368 6/23 (26%)
C2H2 Zn finger 576..594 CDD:275368 0/17 (0%)
C2H2 Zn finger 667..687 CDD:275370 3/19 (16%)
C2H2 Zn finger 702..719 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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