DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and CG3281

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:340 Identity:91/340 - (26%)
Similarity:140/340 - (41%) Gaps:73/340 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 AMYPSMSVNVSMNMTMHHGYG-------AGDAGGVPMQCSQMNWTPPSNSTS------------- 315
            |.|.|.|. ...::.|...||       ..|.|..|:..|:.....|.:|..             
  Fly   122 AQYLSTSF-AEQHVEMEEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENREL 185

  Fly   316 ------AAAAAAAVNVLYPPLLSP----------GHYPASATYSFTADFRAPAPTGLGALPPLTV 364
                  .:....:.|.:|...:.|          .|:  |..:..|||..|              
  Fly   186 SRPSQLGSRLNHSANFIYKCAVCPRVFAKSESLTRHF--SQAHKLTADVAA-------------- 234

  Fly   365 GEKESPSPPANSSLAGYYPTGVGNQGYTPPHKSPTSYQAAALGLSLSAFEDEEDSNEDLDGDEGS 429
                  ...||.|..    ||:    .|..|...|..:...|...:.||..:..:.|..:..:.|
  Fly   235 ------MKLANESCG----TGL----LTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDNS 285

  Fly   430 SGGEM-KPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPF 493
            :...: |...|..||.::. .|:|..|:|.|:|:.||:|..|.|:|.::.:|:.|:|.|||::|.
  Fly   286 ARKRIAKRRDCPHCGLSFP-VSSLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHTGERPS 349

  Fly   494 RCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRF 558
            .|.||.::|...:.:..|||.|:|:|||.|..|.|||..|:.|..|:|.|:||:||||.:|    
  Fly   350 ECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHTGERPYQCGVC---- 410

  Fly   559 SQSGNLNRHMRVHGN 573
            .:|.....|:.:|.|
  Fly   411 GESFVCGSHLNIHRN 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 55/145 (38%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
C2H2 Zn finger 551..571 CDD:275368 4/19 (21%)
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368 3/22 (14%)
C2H2 Zn finger 249..266 CDD:275368 3/16 (19%)
COG5048 <294..>391 CDD:227381 40/97 (41%)
C2H2 Zn finger 296..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:463886 13/23 (57%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
zf-H2C2_2 391..416 CDD:463886 12/28 (43%)
C2H2 Zn finger 407..424 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

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