DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gl and M1BP

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster


Alignment Length:175 Identity:57/175 - (32%)
Similarity:84/175 - (48%) Gaps:21/175 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   415 DEEDSNEDL----------------DGDEGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTHSGER 463
            |:|..:|::                |.....:||..   :|..||.........:.|.|.|.|::
  Fly   216 DDEYEHENIVVKKCSLPPKPKVRSDDARRRGTGGVY---ICEQCGNHIKGRMAFELHCRRHRGDK 277

  Fly   464 PYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKK 528
            .:.|..|...|...:.|..|:|.|||::||.|..|.|.|:..::...|.|||:.||||.|.:|.|
  Fly   278 QFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERTHTNERPYVCGTCGK 342

  Fly   529 SFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMR--VH 571
            :|:....|..|:.|||||:.|:|:||...|....:|:.|.|  ||
  Fly   343 AFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVH 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 51/146 (35%)
C2H2 Zn finger 439..459 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
C2H2 Zn finger 523..543 CDD:275368 6/19 (32%)
C2H2 Zn finger 551..571 CDD:275368 7/21 (33%)
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 19/54 (35%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-H2C2_2 293..317 CDD:463886 11/23 (48%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
zf-H2C2_2 324..346 CDD:463886 12/21 (57%)
C2H2 Zn finger 337..357 CDD:275368 6/19 (32%)
zf-H2C2_2 350..372 CDD:463886 11/21 (52%)
C2H2 Zn finger 365..383 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.