DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and CG8159

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster


Alignment Length:261 Identity:75/261 - (28%)
Similarity:114/261 - (43%) Gaps:45/261 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 TPPHKSPTSYQAAALGL-SLSAFEDEEDSNEDLDG------------------DEGSSG------ 431
            |.| |:|.|.....:.| |||..::|:|..:.||.                  |:|::.      
  Fly   106 TAP-KTPASPLEVMIKLESLSNGDEEDDGIDHLDSCNEADMELAIKAMSSSTEDDGTTSPVRLKR 169

  Fly   432 -----------GEMKPNL------CRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAAN 479
                       ||.:..:      |..||......|:...|||.|||.||::|..|...|..:..
  Fly   170 TRRRGLKKGGKGENRTKVTLPVFFCDQCGNNITGKSSFDRHLRKHSGIRPFQCELCPARFLSSGE 234

  Fly   480 LTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHS 544
            |..|...|||.:.|:|..|||.:...|....|.|||:.:||:.|:.|.|||::|..|..|:.||:
  Fly   235 LKGHQVMHTGDRKFQCRYCDRTYVNYSGRLRHERTHTNDRPFICAQCGKSFTNSYILKNHMLIHT 299

  Fly   545 GEKPYQCKLCLLRFSQSGNLNRHMRVHGNNNSSNGSNGATGVGGESSTGSGVGGGNSLLTXQKPR 609
            ||:.::|:||...|::..:|..|.|  .|.:..|........||...:.|........:| ::|.
  Fly   300 GERLFRCELCHRSFARPTHLKTHFR--SNTHKHNLEKSMADAGGVQLSPSQSADQVKFVTEKEPE 362

  Fly   610 S 610
            :
  Fly   363 A 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 55/167 (33%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 5/19 (26%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 7/19 (37%)
CG8159NP_649823.2 zf-AD 5..78 CDD:214871
C2H2 Zn finger 194..214 CDD:275368 7/19 (37%)
COG5048 <197..322 CDD:227381 48/124 (39%)
C2H2 Zn finger 222..242 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
C2H2 Zn finger 278..298 CDD:275368 8/19 (42%)
C2H2 Zn finger 306..328 CDD:275368 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.

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