DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and ouib

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_649822.2 Gene:ouib / 41039 FlyBaseID:FBgn0037618 Length:312 Species:Drosophila melanogaster


Alignment Length:139 Identity:54/139 - (38%)
Similarity:77/139 - (55%) Gaps:2/139 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 LCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRF 502
            :|.|||.......|.:.|:|.|.||||:.|.||:..|..|..|.||.|.|||::||.|..|::|:
  Fly   168 ICELCGTHATSKPTFQRHMRKHRGERPFGCKDCDARFLSAGELRAHHRVHTGEQPFACRFCEKRY 232

  Fly   503 SQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRH 567
            ........|.|||:.:|||.|..|.|.|:.:..|..|:.||:||:.::|.:|...|.:..:|..|
  Fly   233 VSYMGRLIHERTHTNDRPYVCEECGKKFTTAYVLKNHMVIHTGERNFRCDICDRSFQRKAHLVTH 297

  Fly   568 MR--VHGNN 574
            .|  :|..|
  Fly   298 TRSMMHLQN 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 52/134 (39%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 9/19 (47%)
C2H2 Zn finger 495..515 CDD:275368 5/19 (26%)
C2H2 Zn finger 523..543 CDD:275368 6/19 (32%)
C2H2 Zn finger 551..571 CDD:275368 6/21 (29%)
ouibNP_649822.2 zf-AD 5..78 CDD:214871
C2H2 Zn finger 169..189 CDD:275368 7/19 (37%)
zf-H2C2_2 182..206 CDD:463886 11/23 (48%)
C2H2 Zn finger 197..217 CDD:275368 9/19 (47%)
SFP1 <219..269 CDD:227516 18/49 (37%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
zf-H2C2_2 266..288 CDD:463886 8/21 (38%)
C2H2 Zn finger 281..299 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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