DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and CG11247

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:139 Identity:28/139 - (20%)
Similarity:55/139 - (39%) Gaps:31/139 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NNEQQDLLNKIIRDDSKNKQVLLMINGAARTGKT--FLIKLIENSMNRSAGKRVVLMTGSTGKAA 65
            :|..|.||:|  ....|:|.:.|:::..|..|..  |..:||  |:|.:.....:|.|......|
  Fly    23 SNSNQPLLSK--PKSLKHKNLCLVLSFVAILGSVAFFTAQLI--SVNTNNNDDSLLTTSQICHGA 83

  Fly    66 KAIGGRTLHCTIGLPNEKPEDLESLKSQAFIYATTRLIIIDEITLL------ASWHLDATDMVLK 124
                               .|.:|.::....:.|..|..::.:.||      :.|.|::|..::.
  Fly    84 -------------------HDQDSCQALLSEFTTLSLSKLNRLDLLHVFLKNSVWRLESTMTMVS 129

  Fly   125 RTQKRTDAL 133
            ..:.|::.:
  Fly   130 EARIRSNGV 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381
C2H2 Zn finger 439..459 CDD:275368
C2H2 Zn finger 467..487 CDD:275368
C2H2 Zn finger 495..515 CDD:275368
C2H2 Zn finger 523..543 CDD:275368
C2H2 Zn finger 551..571 CDD:275368
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 9/51 (18%)
C2H2 Zn finger 95..115 CDD:275368 4/19 (21%)
C2H2 Zn finger 123..144 CDD:275368 2/16 (13%)
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 180..200 CDD:275368
COG5048 <192..369 CDD:227381
C2H2 Zn finger 210..230 CDD:275370
C2H2 Zn finger 238..260 CDD:275371
C2H2 Zn finger 267..287 CDD:275368
C2H2 Zn finger 295..315 CDD:275368
C2H2 Zn finger 323..343 CDD:275368
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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