DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and Phs

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster


Alignment Length:308 Identity:80/308 - (25%)
Similarity:120/308 - (38%) Gaps:100/308 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 EKESPSPPANSSLAGYYPTG---VGNQGYTPPHKSPTSYQAAALGLSLSAFEDEEDSNEDLDGDE 427
            |::||:|.       ..|.|   :..:...|..:...|.|.....:.:...|:::|..|:.:.|:
  Fly   535 ERKSPTPV-------LIPLGDKEIKEEPELPERRMRKSRQHVDYVVEIKDEEEDDDEVEEAEVDD 592

  Fly   428 GSS------------------------------GGEMKPNLCRLCGKTYARPSTLKTHLRTHSGE 462
            .||                              ||   .:.|..||||:.|.|.::.|||.|:||
  Fly   593 DSSATISPHNSSTDESFTSIKRESSEESQHNGIGG---IHTCNFCGKTFKRFSRMQDHLRLHTGE 654

  Fly   463 RP--------------------------------------------------------YRCPDCN 471
            :|                                                        |:|..||
  Fly   655 KPYVCGQCGRAFRLKMRLVEHQLRHRAEKAYKCDICSMPLATKQDLSLHMRHHKNDRRYKCDKCN 719

  Fly   472 KSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTL 536
            |.|.::::|:.|||.|||:||:.|.:|.:.|....::..|.|||.|::|.:|..|.|.|:....:
  Fly   720 KGFVRSSDLSIHVRIHTGEKPYSCDLCGKAFRARQNLVVHRRTHLGDKPIQCELCDKRFARKIDM 784

  Fly   537 TKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHM-RVHGNNNSSNGSNGA 583
            ..|:|.|:|||||.|..|...:|...||.||. |.||......||..|
  Fly   785 RVHMRRHTGEKPYNCDACQRGYSSRVNLLRHQEREHGIEEQVPGSGQA 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 63/231 (27%)
C2H2 Zn finger 439..459 CDD:275368 10/19 (53%)
C2H2 Zn finger 467..487 CDD:275368 9/19 (47%)
C2H2 Zn finger 495..515 CDD:275368 5/19 (26%)
C2H2 Zn finger 523..543 CDD:275368 6/19 (32%)
C2H2 Zn finger 551..571 CDD:275368 8/20 (40%)
PhsNP_648789.3 COG5048 <594..787 CDD:227381 46/195 (24%)
C2H2 Zn finger 631..651 CDD:275368 10/19 (53%)
C2H2 Zn finger 715..735 CDD:275368 9/19 (47%)
C2H2 Zn finger 743..763 CDD:275368 5/19 (26%)
C2H2 Zn finger 771..791 CDD:275368 6/19 (32%)
zf-H2C2_2 783..808 CDD:463886 10/24 (42%)
C2H2 Zn finger 799..816 CDD:275370 6/16 (38%)

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