DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and Meics

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:298 Identity:85/298 - (28%)
Similarity:132/298 - (44%) Gaps:57/298 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 TVGEKESPSPPANSSLAGYYPTGVGNQGYTPPHKS------PTSYQA-AALGLSLSAFEDEEDSN 420
            |||..|....|       :.|.|.|.|.....::|      ..||.. .||...::..:::.|: 
  Fly   212 TVGSTEDQDEP-------WIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDT- 268

  Fly   421 EDLDGDEGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVR 485
                         .||:||..||:.:...:.|.||.|.|:||||::||.|.|:::....|.:|:.
  Fly   269 -------------QKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMH 320

  Fly   486 THTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQ 550
            ||..:|..:||.||:.|....::..|::.|:|||||:|..|.::|:.:|.|..|.|:|..|:|::
  Fly   321 THDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFK 385

  Fly   551 CKLCLLRFSQSGNLNRHMRVHGNNNSSNGSNGATGVGGESS------TGSGVGGGNSLLTXQKP- 608
            |:||...|.|:.:|..|:|||..:......:.......:|:      |.||:          || 
  Fly   386 CELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGI----------KPF 440

  Fly   609 --RSAGGFQHYHPPHTHHMHHQHHAHHHHHAHMGNYDY 644
              ...|          ....|.||...|...|.|...|
  Fly   441 KCEECG----------QAFSHNHHLKSHLRIHTGEKPY 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 54/144 (38%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
C2H2 Zn finger 523..543 CDD:275368 7/19 (37%)
C2H2 Zn finger 551..571 CDD:275368 8/19 (42%)
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 4/19 (21%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
SFP1 <296..374 CDD:227516 30/77 (39%)
COG5048 <299..486 CDD:227381 56/190 (29%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 20/94 (21%)
C2H2 Zn finger 414..434 CDD:275368 1/19 (5%)
C2H2 Zn finger 442..462 CDD:275368 5/29 (17%)
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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