DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and ZNF879

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001129588.1 Gene:ZNF879 / 345462 HGNCID:37273 Length:563 Species:Homo sapiens


Alignment Length:140 Identity:70/140 - (50%)
Similarity:96/140 - (68%) Gaps:1/140 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 GEMKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCP 496
            || ||..|:.|||.:::.|.|..|.|.|:||:||:|.:|.|:||..:.|..|.|.|||:||:.|.
Human   396 GE-KPYACKECGKAFSQSSALIQHQRIHTGEKPYKCNECGKAFSWISRLNIHHRIHTGEKPYNCK 459

  Fly   497 ICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQS 561
            .|.:.||..|.|.||.:.|:||:||:|:.|:|:|:.||.|.:|.|||:|||||.||:|...|.||
Human   460 ECGKAFSSHSGVNTHRKIHTGEKPYKCNDCEKAFNQSSALIQHQRIHTGEKPYNCKVCGKAFRQS 524

  Fly   562 GNLNRHMRVH 571
            .:|..|||:|
Human   525 SSLMTHMRIH 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 69/138 (50%)
C2H2 Zn finger 439..459 CDD:275368 8/19 (42%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
C2H2 Zn finger 551..571 CDD:275368 10/19 (53%)
ZNF879NP_001129588.1 KRAB 14..74 CDD:214630
COG5048 202..558 CDD:227381 70/140 (50%)
C2H2 Zn finger 206..226 CDD:275368
C2H2 Zn finger 234..254 CDD:275368
C2H2 Zn finger 262..282 CDD:275368
C2H2 Zn finger 290..310 CDD:275368
C2H2 Zn finger 318..338 CDD:275368
C2H2 Zn finger 346..366 CDD:275368
C2H2 Zn finger 374..394 CDD:275368
C2H2 Zn finger 402..422 CDD:275368 8/19 (42%)
C2H2 Zn finger 430..450 CDD:275368 8/19 (42%)
C2H2 Zn finger 458..478 CDD:275368 8/19 (42%)
C2H2 Zn finger 486..506 CDD:275368 9/19 (47%)
C2H2 Zn finger 514..534 CDD:275368 10/19 (53%)
C2H2 Zn finger 542..562 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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