DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gl and ZSCAN5B

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001073925.2 Gene:ZSCAN5B / 342933 HGNCID:34246 Length:495 Species:Homo sapiens


Alignment Length:224 Identity:77/224 - (34%)
Similarity:109/224 - (48%) Gaps:40/224 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 SP--SPPANSSLAGYYPTG----VGNQG----------YTPPHKSPTSYQAAALGLSLSAFEDEE 417
            ||  |.|..||::...|.|    |||:.          ::|....|.|:.               
Human   295 SPKRSKPDASSISQEEPQGEATPVGNRESPGQAEINPVHSPGPAGPVSHP--------------- 344

  Fly   418 DSNEDLDGDEGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTA 482
                  ||.|..:   :.|..|.:|.|::...|.|..|.|:|:|:||::|..|.|.|.|.::|..
Human   345 ------DGQEAKA---LPPFACDVCNKSFKYFSQLSIHRRSHTGDRPFQCDLCRKRFLQPSDLRV 400

  Fly   483 HVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEK 547
            |.|.|||::|:.|.:|.:||:..|::..|.|.|:||||::|..|.|.||....|..|.|.|||||
Human   401 HQRVHTGERPYMCDVCQKRFAHESTLQGHKRIHTGERPFKCKYCSKVFSHKGNLNVHQRTHSGEK 465

  Fly   548 PYQCKLCLLRFSQSGNLNRHMRVHGNNNS 576
            ||:|..|...|.|.|...||::.|....|
Human   466 PYKCPTCQKAFRQLGTFKRHLKTHRETTS 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 59/144 (41%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 7/19 (37%)
ZSCAN5BNP_001073925.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40
SCAN 40..124 CDD:153421
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..183
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..347 15/72 (21%)
zf-C2H2 355..377 CDD:395048 7/21 (33%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
zf-H2C2_2 370..394 CDD:463886 11/23 (48%)
C2H2 Zn finger 385..405 CDD:275368 8/19 (42%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
zf-H2C2_2 426..450 CDD:463886 11/23 (48%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
zf-H2C2_2 453..478 CDD:463886 13/24 (54%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.