DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and Paris

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:202 Identity:70/202 - (34%)
Similarity:102/202 - (50%) Gaps:39/202 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 SLSAFEDEED--SNEDLDG---------DEGSSGGEMKPNLCRLCGKTYARPS------------ 450
            :|.|..:|||  .:||.|.         |:|.|..:.....||.|.|.|.|..            
  Fly    87 ALCALLEEEDWEISEDEDARIDSASAADDDGKSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDG 151

  Fly   451 ----------------TLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICD 499
                            |||.|::||:..:||.|..|.|:|:|.:.|.:|.|||||::||:|..|.
  Fly   152 QSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCS 216

  Fly   500 RRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNL 564
            :.|.:||.:..|:|||..|||::||.|.|:|:....|..|.|.|:||:|::|..|...|:...:|
  Fly   217 KTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAFAMKQHL 281

  Fly   565 NRHMRVH 571
            .:|.|:|
  Fly   282 KQHSRLH 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 61/172 (35%)
C2H2 Zn finger 439..459 CDD:275368 10/47 (21%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 6/19 (32%)
C2H2 Zn finger 156..176 CDD:275368 4/19 (21%)
COG5048 <180..341 CDD:227381 47/109 (43%)
C2H2 Zn finger 184..204 CDD:275368 8/19 (42%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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