DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and CG3407

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_608809.1 Gene:CG3407 / 33606 FlyBaseID:FBgn0031573 Length:714 Species:Drosophila melanogaster


Alignment Length:716 Identity:155/716 - (21%)
Similarity:211/716 - (29%) Gaps:330/716 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 GHIQISTTPPASSGNGSSNNG--------------------AGGGSSGNHGYWSTDEMASTFPGL 151
            |...:||.|  ||||..|..|                    ....|..|.......:...|||.|
  Fly    34 GPTNLSTNP--SSGNSESGVGYVEKESLTPELNFHNTIFQFVNKSSPENDVVPHQVDAQPTFPAL 96

  Fly   152 ---PPLDIDPLPSLFPFSPCGASYNFAAGNPHQAASLSYT-----------VHPHQMLIS----- 197
               |.:.||....|                 |:...|.|.           |.||:..||     
  Fly    97 AIEPTVPIDVSTGL-----------------HEDEDLLYAHNNASCTNARKVLPHKKRISRKLKG 144

  Fly   198 ------PNSHNHGQ----------------MHSQ-------------------------HQQHQH 215
                  .:.|.|.|                :|:|                         .||||.
  Fly   145 NIDPELDHQHKHVQDVAPSSLYSCEICGYAVHTQLDFFAHLKQHYEPTVLEQRLVVQDPQQQHQQ 209

  Fly   216 ---------------QQSQVQASHVGNSL-LQSSGGNNIGSNGSAGGVANAASCYYETSAGTAAP 264
                           ||.|.:...|...: |.....:||..:     |.:.|             
  Fly   210 KEPLDMCGLSAQDKLQQEQAKLDQVFQDVQLNFENFHNISHH-----VNDVA------------- 256

  Fly   265 PPPPAAAMYPSMSVNVSMNMTMHHGYGAGDAGGVPMQCSQMNWTPPS------------------ 311
                          ||.:||.: ||........|.:..|.   ||.|                  
  Fly   257 --------------NVGVNMVL-HGQATDKLNAVVVNTSS---TPNSVPVVDDVEFSDTEDMLEG 303

  Fly   312 --------------------NSTSAAAAAAAVN-----VLYPPLLSPGHYPASATYSFT------ 345
                                ..||:...|...|     :.:|.||.||..|.:::...|      
  Fly   304 IRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITFPALLLPGEPPPASSEPATPLLKEN 368

  Fly   346 --------ADFRAP----------------------------APTGLGALPPLTVGEKESPSPPA 374
                    .||.:|                            ||......|..||       |||
  Fly   369 PHVGDHMALDFLSPEKADPQEEAKLEKTLSKACEPNEQTLLVAPPACQTPPIPTV-------PPA 426

  Fly   375 NSSLAGYYPTGVGNQGYTPPHKSPTSYQAAALGLSLS-AFEDEEDSNED----LDGDEGSSGGEM 434
            |||:...             .:||         |.|| ||:.|||...|    ...:||....| 
  Fly   427 NSSIEQL-------------RRSP---------LELSEAFKLEEDDMTDSRPASSFEEGDPDAE- 468

  Fly   435 KPN------------------------LCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFS 475
            :||                        .|..|.:.:...:.||.|..||:.||.::|..|.:||.
  Fly   469 EPNECFQMEVLDTSLTEEAENKTRRKHFCDKCNRDFNSYNALKYHQYTHNQERSHKCDSCERSFY 533

  Fly   476 QAANLTAHVRTHTGQKPFR-----------------------------CPICDRRFSQSSSVTTH 511
            ..:.|.||.|||:|.|||:                             |..|.:.||:..|:..|
  Fly   534 TQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHMCEFCGKSFSRRYSLVVH 598

  Fly   512 MRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHGNNNS 576
            .|.|:.|:.|.|..|.|:|..||.|..|:::|:||:||:|.:|..:|..||:|.||.|:|..:.:
  Fly   599 RRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIHDPSRT 663

  Fly   577 S 577
            |
  Fly   664 S 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 60/197 (30%)
C2H2 Zn finger 439..459 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 9/19 (47%)
CG3407NP_608809.1 COG5048 <494..656 CDD:227381 54/161 (34%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
C2H2 Zn finger 525..545 CDD:275368 8/19 (42%)
C2H2 Zn finger 555..574 CDD:275371 0/18 (0%)
C2H2 Zn finger 582..602 CDD:275368 7/19 (37%)
C2H2 Zn finger 610..630 CDD:275368 8/19 (42%)
C2H2 Zn finger 638..658 CDD:275368 9/19 (47%)

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