DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and LOC3290820

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_558380.5 Gene:LOC3290820 / 3290820 VectorBaseID:AGAMI1_005447 Length:617 Species:Anopheles gambiae


Alignment Length:276 Identity:92/276 - (33%)
Similarity:122/276 - (44%) Gaps:74/276 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 QGYTPPHKSPT----SYQAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEMKPNL-CRLCGKTYAR 448
            :.:||....||    :.|.||.|   |..|.......:|...        ||:| |:||..||..
Mosquito   299 KSHTPNETKPTIEAVTTQPAADG---SGVETVIRVKRNLSAP--------KPSLVCKLCNVTYKH 352

  Fly   449 PSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMR 513
            ...|:||:|.|.|:||::|..|.|||.....|..|:|.||||||::|..|:|.:|...|.|.|.|
Mosquito   353 KHALETHMRRHRGDRPHKCDYCEKSFVVPFELQRHMRIHTGQKPYKCQYCERAYSDFGSKTKHER 417

  Fly   514 THSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVH------- 571
            ||:|||||.|..|.|:||.|..|..||.:|:|.|.|.|.:|..||::|.:|..|...|       
Mosquito   418 THTGERPYACHYCDKTFSYSHVLNSHLLVHTGVKKYCCSICGKRFTKSHHLKTHYNTHQITKTDV 482

  Fly   572 -----------GNNNS-------------------------SNGSNG--------ATGVGGESST 592
                       .|:||                         |:|:.|        .||.|..::|
Mosquito   483 GTVQGSEIEMPNNSNSKQQSTDVIYTEQLQDELIASKDEQQSSGNGGVLVDSYHHGTGPGLIAAT 547

  Fly   593 -------GSGVGGGNS 601
                   .:|.|||.|
Mosquito   548 EWTTMVHNNGGGGGGS 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 65/145 (45%)
C2H2 Zn finger 439..459 CDD:275368 9/19 (47%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
C2H2 Zn finger 551..571 CDD:275368 7/19 (37%)
LOC3290820XP_558380.5 None

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