DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and wu:fc30c06

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001314845.1 Gene:wu:fc30c06 / 324469 ZFINID:ZDB-GENE-030131-3190 Length:424 Species:Danio rerio


Alignment Length:248 Identity:82/248 - (33%)
Similarity:112/248 - (45%) Gaps:28/248 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 EDEEDSNEDLDGDEGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAA 478
            ||::...|..|.....:........|..|||::.....|:.|:|.|:||:||||..|..||::..
Zfish    69 EDQDFKTEHEDSTHSQTEVIQSSLTCNQCGKSFTHKQNLRVHMRVHTGEKPYRCSQCGLSFTRKQ 133

  Fly   479 NLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIH 543
            .|..|:..|:|.||:.|..|...||...::..|||.|:||:||.|:.|:.||.....|..|:|||
Zfish   134 TLNGHMSIHSGVKPYLCAQCGLTFSYRKNLNLHMRIHTGEKPYSCTRCELSFRKKQCLKIHMRIH 198

  Fly   544 SGEKPYQCKLCLLRFSQSGNLNRHMRVHGNNN----SSNGSNGATGVG---------GE-----S 590
            :|||||.|..|.|.|:.....|.|.|.|....    :..||:.||...         ||     |
Zfish   199 TGEKPYLCAQCGLSFTHKQTFNSHTRNHTGEKPHTCAQCGSSFATKQSLRIHTRIHTGEKPYMCS 263

  Fly   591 STGSGVGGGNSL------LTXQKP----RSAGGFQHYHPPHTHHMHHQHHAHH 633
            ..|.|....|:|      .|.:||    :...||...|..:||.:.|.....|
Zfish   264 QCGIGFTHKNALNVHFTSHTGEKPYICHQCGSGFTRKHALNTHLVIHTGQKPH 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
zf-C2H2 439..459 CDD:278523 7/19 (37%)
zf-H2C2_2 452..476 CDD:290200 13/23 (57%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
zf-H2C2_2 479..504 CDD:290200 9/24 (38%)
zf-C2H2_8 492..570 CDD:292531 33/77 (43%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
zf-H2C2_2 507..531 CDD:290200 11/23 (48%)
C2H2 Zn finger 523..543 CDD:275368 7/19 (37%)
zf-H2C2_2 536..560 CDD:290200 14/23 (61%)
C2H2 Zn finger 551..571 CDD:275368 7/19 (37%)
wu:fc30c06NP_001314845.1 C2H2 Zn finger 94..114 CDD:275368 7/19 (37%)
zf-H2C2_2 106..131 CDD:290200 13/24 (54%)
C2H2 Zn finger 122..142 CDD:275368 6/19 (32%)
COG5048 146..>390 CDD:227381 57/171 (33%)
C2H2 Zn finger 150..170 CDD:275368 7/19 (37%)
C2H2 Zn finger 178..198 CDD:275368 7/19 (37%)
zf-H2C2_2 191..215 CDD:290200 14/23 (61%)
C2H2 Zn finger 206..226 CDD:275368 7/19 (37%)
C2H2 Zn finger 234..254 CDD:275368 4/19 (21%)
zf-H2C2_2 246..271 CDD:290200 5/24 (21%)
C2H2 Zn finger 262..282 CDD:275368 5/19 (26%)
C2H2 Zn finger 290..310 CDD:275368 5/19 (26%)
C2H2 Zn finger 318..338 CDD:275368
C2H2 Zn finger 346..366 CDD:275368
zf-H2C2_2 359..381 CDD:290200
C2H2 Zn finger 374..394 CDD:275368
C2H2 Zn finger 402..422 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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