DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and CG2202

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster


Alignment Length:167 Identity:70/167 - (41%)
Similarity:98/167 - (58%) Gaps:7/167 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 LCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRF 502
            ||.:||.::||...|:.|:|.|:||:||:|..|.|:|.:|.:|..|.|.|||.||..|..|.:.|
  Fly   627 LCCICGDSFARNDYLRVHMRRHNGEKPYKCRFCVKAFPRATDLKVHERYHTGTKPNLCNTCGKSF 691

  Fly   503 SQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRH 567
            .::.::|.|||||:|||||:|..|.|||:.|:.|..|:|.|:||: |:|..|...|.|..|:..|
  Fly   692 HRAYNLTIHMRTHTGERPYKCDQCPKSFTQSNDLKAHIRRHTGER-YKCPHCDAYFLQLYNMRNH 755

  Fly   568 MRVHGNNNSSNGSNGATGVGGESSTGSGVGGGNSLLT 604
            ..      |::..:..|..|....||....||.|.||
  Fly   756 CM------SAHNKHIETKTGRLQRTGLLDDGGQSHLT 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 60/132 (45%)
C2H2 Zn finger 439..459 CDD:275368 8/19 (42%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
CG2202NP_572657.2 zf-AD 45..121 CDD:214871
C2H2 Zn finger 150..171 CDD:275368
C2H2 Zn finger 192..213 CDD:275370
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381 49/102 (48%)
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 504..525 CDD:275368
C2H2 Zn finger 532..548 CDD:275368
C2H2 Zn finger 573..593 CDD:275368
C2H2 Zn finger 600..620 CDD:275368
C2H2 Zn finger 628..648 CDD:275368 8/19 (42%)
C2H2 Zn finger 656..676 CDD:275368 8/19 (42%)
C2H2 Zn finger 684..704 CDD:275368 7/19 (37%)
C2H2 Zn finger 712..732 CDD:275368 9/19 (47%)
C2H2 Zn finger 739..755 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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