DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and dwg

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster


Alignment Length:186 Identity:75/186 - (40%)
Similarity:103/186 - (55%) Gaps:17/186 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 EMKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPI 497
            |.||..|..||:.||....|:.|..||:|||||.|..|:|::..:::|..|..:|||:|.|.|.|
  Fly   385 EKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKISHTGKKAFTCEI 449

  Fly   498 CDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSG 562
            |....||.|....||..|||.:.::|..|..:|:.:|.|..|:|:||||||::|::|:..|....
  Fly   450 CGVGLSQKSGYKKHMMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKK 514

  Fly   563 NLNRHMRVHGNNN---------SSN------GSNGATGVG--GESSTGSGVGGGNS 601
            .|..|||||...:         |.|      |:.||||.|  |.|.||.|..||::
  Fly   515 RLASHMRVHNKESPVTATVAVQSINPPSRQAGAEGATGGGATGGSPTGGGATGGSA 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 58/137 (42%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 5/19 (26%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 7/19 (37%)
C2H2 Zn finger 551..571 CDD:275368 7/19 (37%)
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 29/65 (45%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
COG5048 <387..523 CDD:227381 57/135 (42%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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