DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and Zbtb49

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001381611.1 Gene:Zbtb49 / 305428 RGDID:1306733 Length:758 Species:Rattus norvegicus


Alignment Length:561 Identity:138/561 - (24%)
Similarity:180/561 - (32%) Gaps:251/561 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 PLPSLFPFSPCGASYNFAAGNPHQAASLSYTVHPHQMLISPNSHNHGQMHSQHQQHQHQQSQVQA 222
            |||.|    ||...::.      |..||..|      ..:.:.|        :..|..|...:: 
  Rat   124 PLPGL----PCAGGFSL------QGVSLDGT------CAAASEH--------YPPHSLQDCPME- 163

  Fly   223 SHVGNSLLQSSGGN------NIGSNGSAGGVANAAS------------CYYETSA--------GT 261
               |......|.||      :.|.....|....|||            |||:...        .|
  Rat   164 ---GPRAKDVSRGNPRAPPADFGRPTGEGSKPAAASGSCPEAPRKQPNCYYKLRTLYSKQYYKQT 225

  Fly   262 AAPPPPPAAAMYPSMSVNVSMNMTMHHGYGAGDAGGVPMQCSQMNWTPPSNSTSAAAAAAAVNVL 326
            |.|.|.||....|:                                  |..||..|||.:     
  Rat   226 ACPSPVPATEQPPT----------------------------------PRASTDLAAADS----- 251

  Fly   327 YPPLLSPGHYPASATYSFTADFRAPAPTGLGALPPLTVGEKESP--------SPPANSSLAGYYP 383
            .||:                :.||..|              |||        :||..||      
  Rat   252 QPPV----------------EGRAGVP--------------ESPEHLASTVVAPPVRSS------ 280

  Fly   384 TGVGNQGYT---PPHKS--------------------------PTSYQAAALGLSLSAFED---- 415
             |:.::..|   ||.|.                          |.|......|...:|.||    
  Rat   281 -GIDSEADTLSQPPAKQMRLKKAMHLKKLNFLKSQQSAECTSHPQSDNVLVRGEESAAKEDAGER 344

  Fly   416 ------EEDSNEDLDGDEGSSGGEM-----------------KPNLCRLCGKTYARPSTLKTHLR 457
                  |:...|:| |.|.|...||                 |...|.||||.:..||.|:.|.|
  Rat   345 AGSQTTEDKGREEL-GPESSREVEMPGAPASWEDPSQALQSQKQYACELCGKPFKHPSNLELHKR 408

  Fly   458 THSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHS------ 516
            :|:||:|:.|..|.|.||||.||..|:|.|:|:||:.|.||.:||:.|..|..|:..||      
  Rat   409 SHTGEKPFECNICGKHFSQAGNLQTHLRRHSGEKPYICEICGKRFAASGDVQRHIIIHSGEKPHL 473

  Fly   517 --------------------------------------------------GERPYRCSSCKKSFS 531
                                                              |||||.|.:|.|.|.
  Rat   474 CDTCGRGFSNFSNLKEHKKTHTADKVFTCDECGKSFNMQRKLVKHRVRHTGERPYSCPACGKCFG 538

  Fly   532 DSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHG 572
            .|..|.:|:|.|:|||||.|::|...|::|..|.||.|:||
  Rat   539 GSGDLRRHVRTHTGEKPYSCEICSKCFTRSAVLRRHKRMHG 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 71/217 (33%)
C2H2 Zn finger 439..459 CDD:275368 10/19 (53%)
C2H2 Zn finger 467..487 CDD:275368 11/19 (58%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 8/19 (42%)
Zbtb49NP_001381611.1 BTB_POZ_ZBTB49 7..118 CDD:349542
PHA03247 <121..300 CDD:223021 55/279 (20%)
zf-C2H2 388..410 CDD:395048 10/21 (48%)
C2H2 Zn finger 390..410 CDD:275368 10/19 (53%)
COG5048 <400..578 CDD:227381 61/177 (34%)
C2H2 Zn finger 418..438 CDD:275368 11/19 (58%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..494 CDD:275368 0/19 (0%)
C2H2 Zn finger 502..522 CDD:275368 0/19 (0%)
C2H2 Zn finger 530..550 CDD:275368 8/19 (42%)
C2H2 Zn finger 558..578 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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