| Sequence 1: | NP_001262708.1 | Gene: | gl / 42210 | FlyBaseID: | FBgn0004618 | Length: | 679 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_218239.6 | Gene: | Zscan5b / 292566 | RGDID: | 1559143 | Length: | 484 | Species: | Rattus norvegicus |
| Alignment Length: | 308 | Identity: | 88/308 - (28%) |
|---|---|---|---|
| Similarity: | 125/308 - (40%) | Gaps: | 68/308 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 311 SNSTSAAAAAAAVNVLYPPLLSPGHYPASATYSFTADFRAPAPT-GLGALP-------PLTVGEK 367
Fly 368 ESPSPPANSSLAGYYPTGVGNQGYTPPHKSPTSYQAAALGLSLSAFEDEEDSNEDLDGDEGSSG- 431
Fly 432 ------------GEMKPNL--------------------------CRLCGKTYARPSTLKTHLRT 458
Fly 459 HSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRC 523
Fly 524 SSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVH 571 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| gl | NP_001262708.1 | COG5048 | <426..571 | CDD:227381 | 60/183 (33%) |
| C2H2 Zn finger | 439..459 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 467..487 | CDD:275368 | 9/19 (47%) | ||
| C2H2 Zn finger | 495..515 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 523..543 | CDD:275368 | 8/19 (42%) | ||
| C2H2 Zn finger | 551..571 | CDD:275368 | 9/19 (47%) | ||
| Zscan5b | XP_218239.6 | SCAN | 33..112 | CDD:153421 | |
| COG5048 | <261..>432 | CDD:227381 | 49/179 (27%) | ||
| C2H2 Zn finger | 334..354 | CDD:275368 | 6/19 (32%) | ||
| SFP1 | <356..411 | CDD:227516 | 24/54 (44%) | ||
| C2H2 Zn finger | 362..382 | CDD:275368 | 9/19 (47%) | ||
| zf-H2C2_2 | 374..399 | CDD:463886 | 11/24 (46%) | ||
| C2H2 Zn finger | 390..410 | CDD:275368 | 6/19 (32%) | ||
| zf-C2H2 | 416..438 | CDD:395048 | 9/21 (43%) | ||
| C2H2 Zn finger | 418..438 | CDD:275368 | 8/19 (42%) | ||
| zf-C2H2 | 444..466 | CDD:395048 | 10/21 (48%) | ||
| C2H2 Zn finger | 446..466 | CDD:275368 | 9/19 (47%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||