DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and ZNF396

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001309215.1 Gene:ZNF396 / 252884 HGNCID:18824 Length:335 Species:Homo sapiens


Alignment Length:157 Identity:52/157 - (33%)
Similarity:75/157 - (47%) Gaps:20/157 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 NEDLDGDEGSSGGEMKPNL-----CRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAAN 479
            :||:......|....|.:|     |.:....:...|...|:..|:..:..:.....|.|:     
Human   188 DEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEKRQGNPSW----- 247

  Fly   480 LTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHS 544
                      :|..:|..|.:.|||||::..|.|.|||::||.|..|.|:||.|:.|.:|.|.|:
Human   248 ----------KKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRTHT 302

  Fly   545 GEKPYQCKLCLLRFSQSGNLNRHMRVH 571
            |||||:|..|...||||.||.||.:.|
Human   303 GEKPYKCHDCGKAFSQSSNLFRHRKRH 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 49/149 (33%)
C2H2 Zn finger 439..459 CDD:275368 3/19 (16%)
C2H2 Zn finger 467..487 CDD:275368 2/19 (11%)
C2H2 Zn finger 495..515 CDD:275368 9/19 (47%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
C2H2 Zn finger 551..571 CDD:275368 10/19 (53%)
ZNF396NP_001309215.1 SCAN 48..157 CDD:128708
COG5048 239..>306 CDD:227381 29/81 (36%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 9/19 (47%)
zf-C2H2 307..329 CDD:395048 11/21 (52%)
C2H2 Zn finger 309..329 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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