DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and Zscan21

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_035887.2 Gene:Zscan21 / 22697 MGIID:99182 Length:555 Species:Mus musculus


Alignment Length:416 Identity:108/416 - (25%)
Similarity:156/416 - (37%) Gaps:116/416 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 PMQCSQMNWTPPSNSTSAAAAAAAVNVLYPPLLSPGHYPASATYSFTADFRAPAPTGLGALPPLT 363
            |....:.:|...|.|.:|..:.::...        .|..||..|.|           .|.|....
Mouse   214 PPNEQKQSWEKMSTSGTAMESLSSTET--------QHVDASPKYEF-----------WGPLYIQE 259

  Fly   364 VGEKE--SPSPPANSSLAGYYPTGVGNQGYTPPHKSPTSYQAAALGLSLSA-------------- 412
            .||:|  :..|.....    :.:....:.....|:| :..::.|.||..:.              
Mouse   260 TGEEEVFTQDPRKRQG----FKSNPQKEDSADEHRS-SEEESHADGLKRTVIPMIPANKYGSRSE 319

  Fly   413 ------FEDEEDSNEDLDGDEGSSGGE----------MKPNLCRLCGKTYARPSTLKTHLRTHSG 461
                  .|.|..:...|. |.||..|.          .|..:|..|||.::..|.|..|.|||:|
Mouse   320 RQWANNLERERGTKASLQ-DTGSRKGAEPASTRPAPGEKRYICAECGKAFSNSSNLTKHRRTHTG 383

  Fly   462 ERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSC 526
            |:||.|..|.|:||.::|||.|.|||...:|:.|. |.:.|.|||.:..|.|.|:.|.||:|..|
Mouse   384 EKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCK-CGKAFGQSSDLLKHQRMHTEEAPYQCKDC 447

  Fly   527 KKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHGNNNSSNGSNGATGVGGESS 591
            .|:||...:|.:|.|||:|||||||..|...|||...|:.|.|:|                    
Mouse   448 GKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLH-------------------- 492

  Fly   592 TGSGVGGGNSLLTXQKP---RSAGGFQHYHPPHTHHMHHQHHAHHHHHAHMGNYDYGNYSIGDYT 653
                        |.:||   :..|          ...:|..:.:.||..|.|...|         
Mouse   493 ------------TGEKPYKCKECG----------KAFNHSSNFNKHHRIHTGEKPY--------- 526

  Fly   654 PPGATQNYSGYYFCALNKAPKFERFY 679
                ..::.|..||:.:...|.:|.:
Mouse   527 ----WCSHCGKTFCSKSNLSKHQRVH 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 68/154 (44%)
C2H2 Zn finger 439..459 CDD:275368 8/19 (42%)
C2H2 Zn finger 467..487 CDD:275368 10/19 (53%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 8/19 (42%)
Zscan21NP_035887.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74
3 X 39 AA approximate tandem repeats 18..134
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..133
SCAN 118..230 CDD:128708 4/15 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..243 5/36 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..354 14/96 (15%)
COG5048 <339..535 CDD:227381 79/251 (31%)
C2H2 Zn finger 361..381 CDD:275368 8/19 (42%)
C2H2 Zn finger 389..409 CDD:275368 10/19 (53%)
C2H2 Zn finger 419..436 CDD:275368 7/16 (44%)
C2H2 Zn finger 444..464 CDD:275368 8/19 (42%)
C2H2 Zn finger 472..492 CDD:275368 8/19 (42%)
C2H2 Zn finger 500..520 CDD:275368 4/29 (14%)
C2H2 Zn finger 528..548 CDD:275368 5/19 (26%)
zf-C2H2 528..548 CDD:395048 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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