DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and ZSCAN29

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001359009.1 Gene:ZSCAN29 / 146050 HGNCID:26673 Length:852 Species:Homo sapiens


Alignment Length:136 Identity:66/136 - (48%)
Similarity:92/136 - (67%) Gaps:0/136 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 PNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDR 500
            |..|..|||:::|.:.|..|.|.|:||:||:|.||.|||..::|...|.|.|||:||::|..|.:
Human   677 PYKCADCGKSFSRSARLIRHRRIHTGEKPYKCLDCGKSFRDSSNFITHRRIHTGEKPYQCGECGK 741

  Fly   501 RFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLN 565
            .|:||||:..|.|||:||:||:|..|.|||::||..:.|.|||:||:|:.|..|...||:|.:|.
Human   742 CFNQSSSLIIHQRTHTGEKPYQCEECGKSFNNSSHFSAHRRIHTGERPHVCPDCGKSFSKSSDLR 806

  Fly   566 RHMRVH 571
            .|.|.|
Human   807 AHHRTH 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 8/19 (42%)
zf-C2H2 439..459 CDD:278523 8/19 (42%)
zf-H2C2_2 452..476 CDD:290200 14/23 (61%)
C2H2 Zn finger 467..487 CDD:275368 9/19 (47%)
zf-H2C2_2 479..504 CDD:290200 11/24 (46%)
zf-C2H2_8 492..570 CDD:292531 37/77 (48%)
C2H2 Zn finger 495..515 CDD:275368 9/19 (47%)
zf-H2C2_2 507..531 CDD:290200 13/23 (57%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
zf-H2C2_2 536..560 CDD:290200 10/23 (43%)
C2H2 Zn finger 551..571 CDD:275368 8/19 (42%)
ZSCAN29NP_001359009.1 SCAN 14..124 CDD:128708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..182
Myb_DNA-bind_4 245..330 CDD:372747
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..400
Myb_DNA-bind_4 408..493 CDD:372747
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 502..557
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..625
COG5048 <630..838 CDD:227381 66/136 (49%)
C2H2 Zn finger 680..700 CDD:275368 8/19 (42%)
C2H2 Zn finger 708..728 CDD:275368 9/19 (47%)
C2H2 Zn finger 736..756 CDD:275368 9/19 (47%)
C2H2 Zn finger 764..784 CDD:275368 9/19 (47%)
C2H2 Zn finger 792..812 CDD:275368 8/19 (42%)
C2H2 Zn finger 820..840 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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