DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gl and LOC1278073

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_061516393.1 Gene:LOC1278073 / 1278073 VectorBaseID:AGAMI1_001431 Length:655 Species:Anopheles gambiae


Alignment Length:223 Identity:60/223 - (26%)
Similarity:99/223 - (44%) Gaps:46/223 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 EDSNEDLD--GDEGSSGGEMK-PNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAA 478
            |::.|.:.  ..|..:..|.| |.:|..|.||:..|:.|:.|.:.|.|.:.:.|..|::.|...:
Mosquito     5 EENGEGIQPTATEHPAESESKAPIICSFCDKTFKYPTMLRQHEKIHYGIKQHECEVCHRRFLHKS 69

  Fly   479 NLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLR-I 542
            .||.|:|.|||:||::||.|.:.|...:::..|:..|:.|.. :|..|.|.|:..|.:.:||: :
Mosquito    70 TLTCHMRLHTGEKPYKCPHCPKTFRGQTALNCHVFRHTNEGA-KCPVCSKVFATGSVVKQHLKQV 133

  Fly   543 HSGEKPYQCKLCLLRFSQSGNLNRHMRVHGNNNSSNGSNGATGVGGESSTGSGVGGGNSLLTXQK 607
            |:.|:...|.||.:.:....:|..|:|.|                                  ||
Mosquito   134 HTEERQNVCNLCGVTYKHLKSLRLHLRNH----------------------------------QK 164

  Fly   608 ---PRSAGGFQHYHPPHTHHMHHQHHAH 632
               |....||.:.|    ..:.|:.|||
Mosquito   165 RMCPECGVGFDNVH----SMLKHRKHAH 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 47/146 (32%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
C2H2 Zn finger 495..515 CDD:275368 5/19 (26%)
C2H2 Zn finger 523..543 CDD:275368 7/20 (35%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
LOC1278073XP_061516393.1 None

Return to query results.
Submit another query.