DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gl and LOC1270880

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_309633.6 Gene:LOC1270880 / 1270880 VectorBaseID:AGAMI1_002527 Length:477 Species:Anopheles gambiae


Alignment Length:432 Identity:90/432 - (20%)
Similarity:146/432 - (33%) Gaps:123/432 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 SPNSHNHGQMHSQH---QQHQHQQSQVQASHVGNS---------------LLQSSGGNNIGSNGS 243
            :|:|....|.::|:   :.:.....|.|.:|:.|.               .|..|....:|...|
Mosquito    89 NPSSDGATQNNAQNVKRESYCRLCGQAQTTHISNEPDLLLKLDKIFQHQLHLSDSSKLPVGVCYS 153

  Fly   244 AGGVANAASCYYET------------SAGTAAPPPPPAAAMYPSMSVNVSMNMTMHHGYGAGDAG 296
            ....||....:::|            |....|..|.|..|...:.|:..|.|:          .|
Mosquito   154 CKETANGIQAFWKTCTQAQETLKAIFSKPRVAKCPEPTEAAIATKSIQESSNL----------EG 208

  Fly   297 GV-------PMQCSQMNWTPPSNSTSAAAAAAAVNVLYPPLLSPGHYPASATYSFTADFRAPAPT 354
            |:       |.:|.::  ...:.||.......|                 ..|.|.: :....|.
Mosquito   209 GIFATKESFPAECEEI--VIDTTSTQVTEEQFA-----------------NEYEFES-YCEELPA 253

  Fly   355 GLGALPPLTVGEKESP---SPPANSSLAGYYPTGVGNQGYTPPHKSPTSYQAAALGLSLSAFEDE 416
            |       |..|.|..   :.|.|..::..|....|                            :
Mosquito   254 G-------TAEESEEVIELTEPDNQLISDDYSIDYG----------------------------D 283

  Fly   417 EDSNEDLDGDEGSSG-GEMK--------------PNLCRLCGKTYARPSTLKTHLRTHSGERPYR 466
            :.|:|:..|:..||. ||.:              .::|.:||..:...:.||.||..||..|.::
Mosquito   284 DSSSEEFTGNLSSSDRGEYRAPVKKDATTPITETKHICEVCGNAFKSLNGLKAHLLVHSERRDHQ 348

  Fly   467 CPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGER-PYRCSSCKKSF 530
            |..|...|.|...|..|:.:...:|.|.|.||...:|....:..||.||.|.. .:.|..|.|:|
Mosquito   349 CTICGHEFKQRRALVEHIESKHERKTFPCKICGMPYSWKKGLQRHMNTHKGNTLKHVCKVCGKAF 413

  Fly   531 SDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRH-MRVH 571
            .....|..|:.:|:|:: ..|:.|...:..:..|.:| :|||
Mosquito   414 PVPHKLKLHMMLHTGDR-IHCEFCGKGYRFNYMLTQHKIRVH 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 44/161 (27%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
C2H2 Zn finger 523..543 CDD:275368 6/19 (32%)
C2H2 Zn finger 551..571 CDD:275368 5/20 (25%)
LOC1270880XP_309633.6 None

Return to query results.
Submit another query.