DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gl and Znf768

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_006230430.1 Gene:Znf768 / 102553763 RGDID:7609558 Length:567 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368
zf-C2H2 439..459 CDD:278523
zf-H2C2_2 452..476 CDD:290200
C2H2 Zn finger 467..487 CDD:275368
zf-H2C2_2 479..504 CDD:290200
zf-C2H2_8 492..570 CDD:292531
C2H2 Zn finger 495..515 CDD:275368
zf-H2C2_2 507..531 CDD:290200
C2H2 Zn finger 523..543 CDD:275368
zf-H2C2_2 536..560 CDD:290200
C2H2 Zn finger 551..571 CDD:275368
Znf768XP_006230430.1 C2H2 Zn finger 290..310 CDD:275368
zf-H2C2_2 303..327 CDD:290200
C2H2 Zn finger 318..338 CDD:275368
COG5048 <326..531 CDD:227381
zf-H2C2_2 330..354 CDD:290200
C2H2 Zn finger 346..366 CDD:275368
zf-H2C2_2 358..381 CDD:290200
zf-C2H2 372..394 CDD:278523
C2H2 Zn finger 374..394 CDD:275368
zf-C2H2 400..422 CDD:278523
C2H2 Zn finger 402..422 CDD:275368
zf-H2C2_2 414..439 CDD:290200
C2H2 Zn finger 430..450 CDD:275368
zf-H2C2_2 446..465 CDD:290200
zf-C2H2 456..478 CDD:278523
C2H2 Zn finger 458..478 CDD:275368
zf-C2H2 484..506 CDD:278523
C2H2 Zn finger 486..506 CDD:275368
zf-H2C2_2 499..521 CDD:290200
C2H2 Zn finger 514..534 CDD:275368
zf-H2C2_2 527..551 CDD:290200
zf-C2H2 540..562 CDD:278523
C2H2 Zn finger 542..562 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.