DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and znf1155

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_009294134.1 Gene:znf1155 / 101885074 ZFINID:ZDB-GENE-050208-712 Length:456 Species:Danio rerio


Alignment Length:179 Identity:67/179 - (37%)
Similarity:100/179 - (55%) Gaps:8/179 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 HKSPTSYQAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTH 459
            |.:...|..:..|.|.|.:.:.:...:...|        ::..:|..|||::.|...||.|.|.|
Zfish   174 HTNKKPYSCSECGNSFSNWSNLKAHQKIHTG--------VREFVCFDCGKSFIRAGGLKNHQRIH 230

  Fly   460 SGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCS 524
            :||:||:|..|:|||:|...|..|.|||||:||:.|..|.:.|.||.:...|:..|:||:|::|.
Zfish   231 TGEKPYKCSHCDKSFNQLQILKVHRRTHTGEKPYTCTHCGKSFRQSPNFYRHLLIHTGEKPHKCD 295

  Fly   525 SCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHGN 573
            .|.|:|...|.|..|||:|:.||||.|..|...|:|..||.:|.::|.:
Zfish   296 HCSKTFLWPSELKDHLRVHTNEKPYACSECGKSFTQQSNLRQHQKIHAS 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 9/19 (47%)
zf-C2H2 439..459 CDD:278523 9/19 (47%)
zf-H2C2_2 452..476 CDD:290200 14/23 (61%)
C2H2 Zn finger 467..487 CDD:275368 9/19 (47%)
zf-H2C2_2 479..504 CDD:290200 12/24 (50%)
zf-C2H2_8 492..570 CDD:292531 32/77 (42%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
zf-H2C2_2 507..531 CDD:290200 8/23 (35%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
zf-H2C2_2 536..560 CDD:290200 12/23 (52%)
C2H2 Zn finger 551..571 CDD:275368 7/19 (37%)
znf1155XP_009294134.1 COG5048 79..454 CDD:227381 67/179 (37%)
C2H2 Zn finger 98..118 CDD:275368
zf-H2C2_2 110..133 CDD:290200
C2H2 Zn finger 126..146 CDD:275368
zf-H2C2_2 138..161 CDD:290200
C2H2 Zn finger 154..174 CDD:275368 67/179 (37%)
C2H2 Zn finger 182..202 CDD:275368 3/19 (16%)
C2H2 Zn finger 210..230 CDD:275368 9/19 (47%)
zf-H2C2_2 223..247 CDD:290200 14/23 (61%)
C2H2 Zn finger 238..258 CDD:275368 9/19 (47%)
zf-H2C2_2 251..275 CDD:290200 12/23 (52%)
C2H2 Zn finger 266..286 CDD:275368 6/19 (32%)
zf-H2C2_2 278..301 CDD:290200 8/22 (36%)
C2H2 Zn finger 294..314 CDD:275368 9/19 (47%)
zf-H2C2_2 306..331 CDD:290200 12/24 (50%)
C2H2 Zn finger 322..342 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
zf-H2C2_2 390..414 CDD:290200
C2H2 Zn finger 406..426 CDD:275368
zf-H2C2_2 418..443 CDD:290200
C2H2 Zn finger 434..454 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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