Sequence 1: | NP_650716.2 | Gene: | Nup43 / 42209 | FlyBaseID: | FBgn0038609 | Length: | 358 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001016144.1 | Gene: | nup43 / 548898 | XenbaseID: | XB-GENE-1017294 | Length: | 375 | Species: | Xenopus tropicalis |
Alignment Length: | 370 | Identity: | 109/370 - (29%) |
---|---|---|---|
Similarity: | 185/370 - (50%) | Gaps: | 35/370 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 YISEKVSQVRWLP---EELQQSERFVTGSWDMDQNFVRLWRLQSNQYVTATDSEVDQIPRCMDKV 71
Fly 72 RMEDDVTAMEFVDKDTLAVSCADGHLSVFNVHRAVEEDQ-MQRTSRSGRLHCFQRSQEPAPCTDL 135
Fly 136 SVYGTDIATAGEDGCVSIVSVENVRQVKRQI-EADSMALFSICYISQQELVTANRMGVIRMLDAR 199
Fly 200 VATEAQPKTTFMVASQDDKSNFVSSLAKHPMQQHILLCGSEEGSITVWDMRNLSYPASYLSAHKS 264
Fly 265 PINEIGFHQKDPSKLFTAAEGGEVWMW---------------------SENKVLGCDYNKDGHSP 308
Fly 309 WLSGDRVRSLVDVEGVLSNVRKSINSFDVHGSRLVCGGDTEAVYL 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup43 | NP_650716.2 | WD40 repeat | 16..73 | CDD:293791 | 19/59 (32%) |
WD40 | 74..347 | CDD:295369 | 83/295 (28%) | ||
WD40 repeat | 77..125 | CDD:293791 | 10/48 (21%) | ||
WD40 repeat | 133..166 | CDD:293791 | 10/32 (31%) | ||
WD40 | <142..344 | CDD:225201 | 64/223 (29%) | ||
WD40 repeat | 173..211 | CDD:293791 | 7/37 (19%) | ||
WD40 repeat | 222..263 | CDD:293791 | 15/40 (38%) | ||
WD40 repeat | 266..291 | CDD:293791 | 10/24 (42%) | ||
nup43 | NP_001016144.1 | WD40 | 29..323 | CDD:295369 | 82/302 (27%) |
WD40 | <32..311 | CDD:225201 | 80/287 (28%) | ||
WD40 repeat | 79..124 | CDD:293791 | 9/47 (19%) | ||
WD40 repeat | 129..165 | CDD:293791 | 13/36 (36%) | ||
WD40 repeat | 173..209 | CDD:293791 | 7/36 (19%) | ||
WD40 repeat | 217..255 | CDD:293791 | 13/40 (33%) | ||
WD40 repeat | 263..299 | CDD:293791 | 11/35 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 177 | 1.000 | Domainoid score | I3524 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H11639 | |
Inparanoid | 1 | 1.050 | 178 | 1.000 | Inparanoid score | I3919 |
OMA | 1 | 1.010 | - | - | QHG59409 | |
OrthoDB | 1 | 1.010 | - | - | D311838at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007248 | |
OrthoInspector | 1 | 1.000 | - | - | oto103258 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR22652 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3018 |
SonicParanoid | 1 | 1.000 | - | - | X7163 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.110 |