Sequence 1: | NP_650716.2 | Gene: | Nup43 / 42209 | FlyBaseID: | FBgn0038609 | Length: | 358 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998057.1 | Gene: | nup43 / 405828 | ZFINID: | ZDB-GENE-040426-2533 | Length: | 372 | Species: | Danio rerio |
Alignment Length: | 389 | Identity: | 117/389 - (30%) |
---|---|---|---|
Similarity: | 186/389 - (47%) | Gaps: | 67/389 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 VSTHYISEKVSQVRWLP---EELQQSERFVTGSWDMDQNFVRLWRLQSNQYVTATDSEVDQIPRC 67
Fly 68 MDKVRMEDDVTAMEFVDKDTLAVSCADGHLSVFNVHRAVEEDQMQRTSRSGRLHCFQR----SQE 128
Fly 129 PAPCTDLSVYGTDIATAGEDGCVSIVSVENVRQVKRQIE-ADSMALFSICYISQQELVTANRMGV 192
Fly 193 IRMLDARVATEAQPKTTFMVASQDDKSNFVSSLA----------KHPMQQHILLCGSEEGSITVW 247
Fly 248 DMRNLSYPASYLSAHKSPINEIGFHQKDPSKLFTAAEGGEVWMWSENKVLGCDY----------- 301
Fly 302 ------------NKDGHSPWLSGDRVRSLVDVEGVLSNVRKSINSFDVHGSRLVCGGDTEAVYL 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup43 | NP_650716.2 | WD40 repeat | 16..73 | CDD:293791 | 20/59 (34%) |
WD40 | 74..347 | CDD:295369 | 88/310 (28%) | ||
WD40 repeat | 77..125 | CDD:293791 | 11/47 (23%) | ||
WD40 repeat | 133..166 | CDD:293791 | 9/32 (28%) | ||
WD40 | <142..344 | CDD:225201 | 66/235 (28%) | ||
WD40 repeat | 173..211 | CDD:293791 | 7/37 (19%) | ||
WD40 repeat | 222..263 | CDD:293791 | 17/50 (34%) | ||
WD40 repeat | 266..291 | CDD:293791 | 9/24 (38%) | ||
nup43 | NP_998057.1 | WD40 | 73..>294 | CDD:295369 | 71/245 (29%) |
WD40 repeat | 78..122 | CDD:293791 | 11/51 (22%) | ||
WD40 | <138..361 | CDD:225201 | 69/239 (29%) | ||
WD40 repeat | 170..209 | CDD:293791 | 11/52 (21%) | ||
WD40 repeat | 214..251 | CDD:293791 | 14/36 (39%) | ||
WD40 repeat | 259..294 | CDD:293791 | 12/36 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170588209 | |
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6850 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4714 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H11639 | |
Inparanoid | 1 | 1.050 | 178 | 1.000 | Inparanoid score | I4023 |
OMA | 1 | 1.010 | - | - | QHG59409 | |
OrthoDB | 1 | 1.010 | - | - | D311838at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007248 | |
OrthoInspector | 1 | 1.000 | - | - | oto39479 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106008 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR22652 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3018 |
SonicParanoid | 1 | 1.000 | - | - | X7163 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.800 |