DRSC/TRiP Functional Genomics Resources

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Protein Alignment WRNexo and AT3G11770

DIOPT Version :9

Sequence 1:NP_001163646.1 Gene:WRNexo / 42208 FlyBaseID:FBgn0038608 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_187783.1 Gene:AT3G11770 / 820351 AraportID:AT3G11770 Length:200 Species:Arabidopsis thaliana


Alignment Length:113 Identity:25/113 - (22%)
Similarity:44/113 - (38%) Gaps:48/113 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 HGVNIKN--DFRKLARDFPEVTAEPLIEKCVDLG--------LWCNEVCETGGRWSLERLTNFIA 270
            ||:.|::  :..|||   .:....|::|   .||        ||          :.:.||.:.  
plant   122 HGIVIRSSLEIGKLA---AKARGTPIVE---FLGTRELAHKILW----------YDMSRLDSI-- 168

  Fly   271 KKAMDKSKKVRMSKWHVIPLDE----NQLMYAAIDVYIGQVIYRELER 314
                       .|||     ||    ::|..|||:.::...:|.:|::
plant   169 -----------QSKW-----DEASSNDRLEAAAIEGWLIFNVYDQLQQ 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WRNexoNP_001163646.1 WRN_exo 142..314 CDD:176653 25/111 (23%)
AT3G11770NP_187783.1 DnaQ_like_exo 43..200 CDD:415823 25/111 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1295758at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13620
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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