DRSC/TRiP Functional Genomics Resources

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Protein Alignment WRNexo and wrn

DIOPT Version :10

Sequence 1:NP_001163646.1 Gene:WRNexo / 42208 FlyBaseID:FBgn0038608 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_012810306.2 Gene:wrn / 734043 XenbaseID:XB-GENE-992875 Length:1433 Species:Xenopus tropicalis


Alignment Length:244 Identity:78/244 - (31%)
Similarity:124/244 - (50%) Gaps:26/244 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EKLPFIKYKGAIKYFTESQDIAASADDVLQWVEKQKDEVVPMAFDMEWPFSFQTG-PGKSAVIQI 182
            :.||::|:.|:|.|..|..|.:..::|:..  ..|:::|  :.||:|||..:..| .||.|:||:
 Frog    36 DNLPYLKFNGSIVYSYEGNDCSLLSEDIRS--SLQEEDV--LGFDIEWPPIYTKGKTGKVALIQV 96

  Fly   183 CVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVTAEPLIE--KCVD 245
            ||.||.||::.::.:...|..|..|:....|:..||.|:.|..||..|: |:..:..||  :..:
 Frog    97 CVSEKKCYLFHISPMAGFPKGLRRLLEDESVKKVGVGIEGDQWKLMSDY-ELKLKGFIELSEVAN 160

  Fly   246 LGLWCNEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYR 310
            ..|.|.|      :|||..|...:.||.:.|...:|.|.|.:.||..:|.:|||.|.|.|.:||:
 Frog   161 QKLRCKE------KWSLNGLVKHLFKKQLLKDSSIRCSNWDIFPLSTDQKLYAASDAYAGLLIYQ 219

  Fly   311 ELE---RREKVKIKNEEEFKEKNGDAAFKAMKA----LGETFLTKINEV 352
            :||   ..|||..     ...:.|.|.|:.:|.    |...|:..:.:|
 Frog   220 KLECMDAHEKVSF-----CVSRVGVADFEGIKRQLTDLSNGFMDLVKDV 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WRNexoNP_001163646.1 PLN02967 16..>114 CDD:215521
WRN_exo 142..314 CDD:176653 60/177 (34%)
wrnXP_012810306.2 WRN_exo 55..222 CDD:176653 59/177 (33%)
recQ_fam 477..950 CDD:129701
HRDC 1098..1176 CDD:128635
HTH_40 1205..1299 CDD:464189
Blue background indicates that the domain is not in the aligned region.

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