DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WRNexo and Exd2

DIOPT Version :9

Sequence 1:NP_001163646.1 Gene:WRNexo / 42208 FlyBaseID:FBgn0038608 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001102185.1 Gene:Exd2 / 362759 RGDID:1311087 Length:648 Species:Rattus norvegicus


Alignment Length:315 Identity:66/315 - (20%)
Similarity:120/315 - (38%) Gaps:79/315 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 PDVKTEKLAMEEENPPKRRSSRLTRSTRSMAEDGS---PSPEKEKPEKLPFIKYKGAIK------ 131
            |..:.:....:::.||::...:       ....|:   |.||   .::|||    ||::      
  Rat    47 PQQQQQPQPQQQQQPPQQEQQK-------QQVPGAREWPPPE---DDQLPF----GALRTPRASW 97

  Fly   132 --------YFTESQDIAASADDVLQWVEKQKDEVVPMAFDMEWPFSFQTGPGKSAVIQICVDEKC 188
                    ..|.||:  |..:.:..:::::.::...:..|.|| .:.:......:::|:......
  Rat    98 EERILQAEVVTVSQE--AEWNQIQPFLKRELEDFPVLGIDCEW-VNLEGKASPLSLLQMASPSGF 159

  Fly   189 CYIYQLTNV----KKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVTAEPLIEKCVDL--- 246
            |.:.:|..:    |.||..|:.::....:...||....|..||.:|:..:     :..|:||   
  Rat   160 CALVRLPRLIYGGKTLPRTLLDILADGTILKVGVGCSEDANKLLQDYGLI-----VRGCLDLRYL 219

  Fly   247 ------GLWCNEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIG 305
                  .:.||.:       ||:.|...:....:|||..:|.|.|....|.|:|:.|||.|..|.
  Rat   220 AMKQGNSVLCNGL-------SLKSLAETLLNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQIS 277

  Fly   306 QVIYRELERREKVKIKNEEEFKEKNG---------------DAAF--KAMKALGE 343
            ..::..|......:...||   |.||               |..|  |.:..|||
  Rat   278 VALFLHLLGYPFSRNSYEE---ENNGQINWQKVLEKCRDMVDIPFRSKGLARLGE 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WRNexoNP_001163646.1 WRN_exo 142..314 CDD:176653 39/184 (21%)
Exd2NP_001102185.1 WRN_exo 109..285 CDD:176653 41/190 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4373
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13620
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.