Sequence 1: | NP_001287388.1 | Gene: | CG15803 / 42206 | FlyBaseID: | FBgn0038606 | Length: | 880 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001119800.1 | Gene: | LNX1 / 84708 | HGNCID: | 6657 | Length: | 728 | Species: | Homo sapiens |
Alignment Length: | 569 | Identity: | 120/569 - (21%) |
---|---|---|---|
Similarity: | 205/569 - (36%) | Gaps: | 166/569 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 164 LVGLVRGGPAEGTELSAVEPQPSAAVLQLQQLSELAGDLADFPLPPI------------------ 210
Fly 211 PGGGGHSMVTDSNAGQRPCPRLDLDIVPFSILSPPPRPALQML--PLETQWRCVQDQNRHIETVI 273
Fly 274 ADSKRKLLANEDGGSASASGSGSPDSYMDSPETETYVVELHKN--VYGLGITVAGYVCEEEDLSG 336
Fly 337 IFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRNTDIVVHLTLERFLRGRKYE 401
Fly 402 HLQVALTEIKGTSAPSGLDRSQ------------------DKDQDQESQLSMPGSPS-------I 441
Fly 442 ATLSWLPPKSLDADSIATEGDEAVDAEYVGISGAEDEFIELPSRDTVESNMSHVLDRSDHSGGLT 506
Fly 507 KDQVPRISPIVPLTNGRSLILADDSGNDTDEQCAEPETETAQARKGSKPETERVKDLGDTKTDTD 571
Fly 572 PDPDLDPG-----QMPTPT-NEAPVKAASPTAASLRVAWKSLGISLEGTVDVECGIEKRPHHYIR 630
Fly 631 SILADGPVGRQGILRPGDELLQVNEHKLQGLRHIEVVKILKELPARVKL 679 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG15803 | NP_001287388.1 | PDZ_signaling | 17..89 | CDD:238492 | |
PDZ | 307..393 | CDD:214570 | 25/87 (29%) | ||
PDZ_signaling | 605..680 | CDD:238492 | 26/75 (35%) | ||
PDZ | 773..858 | CDD:214570 | |||
LNX1 | NP_001119800.1 | mRING-HC-C3HC3D_LNX1 | 38..79 | CDD:319693 | |
modified RING-HC finger (C3HC3D-type) | 41..78 | CDD:319693 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..214 | ||||
NPXY motif | 181..184 | ||||
Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 | 186..244 | ||||
PDZ_signaling | 272..355 | CDD:238492 | 18/118 (15%) | ||
PDZ_signaling | 380..460 | CDD:238492 | 25/83 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 475..494 | 5/18 (28%) | |||
PDZ_signaling | 505..588 | CDD:238492 | 17/94 (18%) | ||
PDZ_signaling | 637..721 | CDD:238492 | 28/92 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR19964 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |