DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15803 and PDZD3

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_011541302.1 Gene:PDZD3 / 79849 HGNCID:19891 Length:571 Species:Homo sapiens


Alignment Length:413 Identity:100/413 - (24%)
Similarity:155/413 - (37%) Gaps:117/413 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LINDGNGLGFILVGGRSTGVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSSEQVATVLRQ 79
            ::.|..|.||.:..| :.|.....|:.||.|||.| :..|..||::..|::..|:..|:...|.|
Human   226 IVKDEGGFGFSVTHG-NQGPFWLVLSTGGAAERAG-VPPGARLLEVNGVSVEKFTHNQLTRKLWQ 288

  Fly    80 TGAQVRLIVARPVEPTAIDYQTLACQAPI-----IPTKLLSDPEELSRHLFQNPSFATAAVAAAA 139
            :|.||.|:||.|..........|...||:     :|||    |..|  ||.:.|.          
Human   289 SGQQVTLLVAGPEVEEQCRQLGLPLAAPLAEGWALPTK----PRCL--HLEKGPQ---------- 337

  Fly   140 AAAAAAGSGSDGDVGGGGVLDVASLVGLVRGGPAEGTELSAVEPQPSAAVLQLQ---QLSELAGD 201
                           |.|.| :....|| .|.|  |..|..|:|...|....:|   :|..:||:
Human   338 ---------------GFGFL-LREEKGL-DGRP--GQFLWEVDPGLPAKKAGMQAGDRLVAVAGE 383

  Fly   202 LADFPLPPIPGGGGHSMVTDSNAGQRPCPRLDLDIVP------FSI--LSP-----------PPR 247
            ..:        |.||........||..|  :.|.:|.      ||:  |||           .||
Human   384 SVE--------GLGHEETVSRIQGQGSC--VSLTVVDPEADRFFSMVRLSPLLFLENTEAPASPR 438

  Fly   248 PALQMLPLETQWRCVQDQNRHIETVIADSKRKLLANEDGGSASASGSGSPDSYMDSPETETYVVE 312
            .:.....:||:...::|.:  :.:|...|::..|....|||                        
Human   439 GSSSASLVETEDPSLEDTS--VPSVPLGSRQCFLYPGPGGS------------------------ 477

  Fly   313 LHKNVYGLGITVAGYVCEEEDLSG--IFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQ 375
                 ||..::...        ||  :|:..:..|.:|..:| :|:.|.|:.|:|..:.|..:.:
Human   478 -----YGFRLSCVA--------SGPRLFISQVTPGGSAARAG-LQVGDVILEVNGYPVGGQNDLE 528

  Fly   376 AVELLRNTDIVVHLTL-ERFLRG 397
            .::.|...:..:.|.| .|.|||
Human   529 RLQQLPEAEPPLCLKLAARSLRG 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 25/71 (35%)
PDZ 307..393 CDD:214570 17/88 (19%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
PDZD3XP_011541302.1 PDZ_signaling 113..193 CDD:238492
PDZ_signaling 221..298 CDD:238492 25/73 (34%)
PDZ 326..411 CDD:214570 30/129 (23%)
PDZ_signaling 466..545 CDD:238492 20/116 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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