DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15803 and lnx2

DIOPT Version :10

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001072606.1 Gene:lnx2 / 780062 XenbaseID:XB-GENE-877144 Length:685 Species:Xenopus tropicalis


Alignment Length:691 Identity:133/691 - (19%)
Similarity:231/691 - (33%) Gaps:193/691 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSSEQVATVLRQTGAQVRLIVARPVEPTAIDYQ 100
            :|...||....|:   .|..|.....::.:.|   |..:.::...|         ||.|.: |..
 Frog   131 LKNRCPGASHRRE---LLNQHRASKLQIEIEG---ENGSVLIDHQG---------PVSPES-DKT 179

  Fly   101 TLACQAP---IIPTKLLSDPEELSRHLFQNPSFATAAVAAAAAAAAAAGSGSDGDVGGGGVLDVA 162
            ......|   :.|:.:   |..:..|.|.||:|..:.||.|.....:...|.            .
 Frog   180 RSGSALPERNVTPSVM---PAWMEEHGFDNPAFEESTVADATHPPPSLPEGE------------I 229

  Fly   163 SLVGLVRGGPAEGTELSAVEPQPSAAV-LQLQQLSE----------LAGD----LADFPLPPIPG 212
            :.:.:.|..|.....:|.|....:..: :.:|::..          ||||    :.:|.:     
 Frog   230 TTIEIHRSNPYIELGISIVGGNETPLINVVIQEIYRDGVIARDGRLLAGDQILQVNNFDI----- 289

  Fly   213 GGGHSMVTDSNAG---QRPCPRLDLDIVPFSILSPPPRPALQMLPLETQWRCVQDQNRHIETVIA 274
                |.|:.:.|.   .:||..|.|                                    ||:.
 Frog   290 ----SNVSHNYARWVLSQPCTVLHL------------------------------------TVLR 314

  Fly   275 DSKRKLLANEDGGSASASGSGSPDSYMDSPETETYVVELHKNVYG--LGITVAGYVCEEEDLSGI 337
            :.:       .|..|...|.|.      |...|::.:.|:|....  |||.:.    ...|.||:
 Frog   315 ERR-------FGSRAHGHGDGG------SQRDESFHITLNKRGSNEQLGIKLV----RRTDESGV 362

  Fly   338 FVKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRNTDIVVHLTLERFLRGRKYEH 402
            |:..::||..|...|::..|||::|::|..|...|...|.::::.:...|:||:.|         
 Frog   363 FILDLLEGGLAAQDGRLHSNDRVLAINGLDLKHGTPELAAQIIQGSGERVNLTVSR--------- 418

  Fly   403 LQVALTEIKGTSAPSGLDR----SQDKDQDQESQLSMPGS-PSIATLSWLPPKSLDADSIATEGD 462
                    .|...|..:.|    :|.....|:.....|.: ..:|.......|.:   ::..|..
 Frog   419 --------PGKHQPGNITRDLGMNQPHHHTQQVYHHRPSAHKDLAQCVKCQEKHI---TVKKEPQ 472

  Fly   463 EAVDAEYVGISGAEDEFIELPSRDTVESNMSHVLDRSDHSGGLTKDQVPRISPIVPLTNGRSLIL 527
            |::.....|..|::..  |||.  .|.|...|        |.|.:|...:...::...||  :.|
 Frog   473 ESLGMTVAGGRGSKSG--ELPI--FVTSVQPH--------GCLARDSRIKRGDVLLSING--IDL 523

  Fly   528 ADDSGNDTDEQCAEPETETAQARKGSKPETERVKDLGDTKTDTDPDPDLDPGQMPTPTNEAPVKA 592
            .:.|.::.........|.:..:.|..:.|....:..|..:..|..:.:.|....|:         
 Frog   524 TNLSHSEAVAMLKASATSSVVSLKAIEVEVIEEQTPGKEEMSTVSENEYDASWSPS--------- 579

  Fly   593 ASPTAASLRVAWKSLGISLEGTVDVEC--------------GIEKRPHH-----YIRSILADGPV 638
                    .|.|..|...|....||..              |.|:  :|     :|::|:...|.
 Frog   580 --------WVMWLGLPSCLHSCHDVVLRRSSLGSWGFSIVGGYEE--NHTNQPFFIKTIVLGTPA 634

  Fly   639 GRQGILRPGDELLQVNEHKLQGLRHIEVVKILKELPARVKL 679
            ...|.|:.||.::.||.....|:.|..:|.:|||...:|.|
 Frog   635 YYDGRLKCGDMIIAVNGLSTVGMSHSALVPMLKEQRNKVTL 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ4_MUPP1-like 592..683 CDD:467156 26/107 (24%)
PDZ5_MUPP1-like 763..859 CDD:467157
PDZ2_MUPP1-like 11..90 CDD:467155 9/53 (17%)
PDZ3_MUPP1-like 307..393 CDD:467253 25/87 (29%)
lnx2NP_001072606.1 mRING-HC-C3HC3D_LNX2 43..87 CDD:319694
PDZ1_LNX1_2-like 227..315 CDD:467165 20/144 (14%)
PDZ2_LNX1_2-like 336..418 CDD:467166 24/85 (28%)
PDZ3_LNX1_2-like 463..550 CDD:467167 20/103 (19%)
PDZ4_LNX1_2-like 594..682 CDD:467168 22/84 (26%)
Blue background indicates that the domain is not in the aligned region.

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