DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and Grip1

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_006514294.1 Gene:Grip1 / 74053 MGIID:1921303 Length:1185 Species:Mus musculus


Alignment Length:963 Identity:199/963 - (20%)
Similarity:329/963 - (34%) Gaps:325/963 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EWSQVEVIDLI-NDGNGLGFILVGG--RSTGVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRG 67
            |:....|::|: .:|..||..:.||  :.....:..|..||:|.|..:|.:||::..:..:||..
Mouse   104 EFKGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAK 168

  Fly    68 FSSEQVATVLRQTGAQVRLIVARPVEPTAID-----YQTLACQAPIIPTKLLSDPEELSRHLFQN 127
            |..:::.::|:..|.:|.|.|...:.|.::.     ::|:                |::.|    
Mouse   169 FRHDEIISLLKNVGERVVLEVEYELPPVSVQGSSVMFRTV----------------EVTLH---- 213

  Fly   128 PSFATAAVAAAAAAAAAAGSGSDGDVGG----GGVLDVAS-----LVGLVR-GGPA--EGTELSA 180
                                 .:|:..|    ||..|..:     ::..|| ||||  |||    
Mouse   214 ---------------------KEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGT---- 253

  Fly   181 VEPQPSAAVLQLQQLSELAGDLADFPLPPIPGGGGHSMVTDSNAGQRPCPRLDLDIVPFSILSPP 245
            ::|                ||                             || |.:....:|...
Mouse   254 IKP----------------GD-----------------------------RL-LSVDGIRLLGTT 272

  Fly   246 PRPALQMLPLETQWRCVQDQNRHIETVIADSKRKLLANEDGGSASASGSGSPDSYMDSPETET-- 308
            ...|:.:|.     :|.|:....||..:                         |.|||..|.:  
Mouse   273 HAEAMSILK-----QCGQEATLLIEYDV-------------------------SVMDSVATASGP 307

  Fly   309 YVVELHKNV-YGLGITVAGYVCEEEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVT 372
            .:||:.|.. ..||:.:...||..:.:  |.:..|...|.|:..|.:.:.|.|:::||.|:...|
Mouse   308 LLVEVAKTPGASLGVALTTSVCCNKQV--IVIDKIKSASIADRCGALHVGDHILSIDGTSMEYCT 370

  Fly   373 NHQAVELLRNT------DIVVHLTLERFLRGRKYEHLQVALTEIKGTSAPSGLDRSQDKDQDQES 431
            ..:|.:.|.||      :|:.|......|:|.  :|:::..:           ||....|....:
Mouse   371 LAEATQFLANTTDQVKLEILPHHQTRLALKGP--DHVKIQRS-----------DRQHPWDAWASN 422

  Fly   432 QLSM----------PGSPSIATLSW---LPPKSLDADSIATEGDEAVDAEYVGISGAEDEFIELP 483
            |..:          |....:..|::   |||.|..|                          .:|
Mouse   423 QCGVHTNHHHNTYHPDHCRVPALTFPKALPPNSPPA--------------------------MVP 461

  Fly   484 SRDTVESNMSHVLDRSDHSGGLTKDQVPRISPIVPLTNGRSLILADDSGNDTDEQCAEPETETAQ 548
            |  :..::||.....|.:.|.|.                |||......|             |..
Mouse   462 S--SSPTSMSAYSLSSLNMGTLP----------------RSLYSTSPRG-------------TMM 495

  Fly   549 ARKGSKPETERVKDLGDTKTDTDPDPDLDPGQ-MPTPTNEAPVKAASPTAASLRVAWKSLGISLE 612
            .|:..|.:.:....|..:....       .|| :.|.|.|. |..|.|..        ..||.|:
Mouse   496 RRRLKKKDFKSSLSLASSTVGL-------AGQVVHTETTEV-VLTADPVT--------GFGIQLQ 544

  Fly   613 GTVDVECGIEKRPHHYIRSILADGPVGRQGILRPGDELLQVN---------EHKLQGLRHIEVV- 667
            |:|.....:...|  .|..|.||.|..|.|:|:.||.::.:|         |...|.||...:. 
Mouse   545 GSVFATETLSSPP--LISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITS 607

  Fly   668 KILKELPARVKLVCARGTHVPSVINTSQNPEAFETRSLLPGGHQSLQNLLSKAQSESSLYTSSTA 732
            |:..|:...|         ..|||.:|   ..|..:  ||..|.  ..|.....|.||.......
Mouse   608 KVTLEIEFDV---------AESVIPSS---GTFHVK--LPKKHS--VELGITISSPSSRKPGDPL 656

  Fly   733 TLTD--AGAAAGGSGGTAGGGARSKSLENV---------SGLALWSCE----------------- 769
            .::|  .|:.|..: ||...|.:..:::|:         :...|..||                 
Mouse   657 VISDIKKGSVAHRT-GTLELGDKLLAIDNIRLDNCSMEDAVQILQQCEDLVKLKIRKDEDNSDEQ 720

  Fly   770 ------VTAVDIEKTEQGFGFSILDYQDPLDSEGSVIVIRGLIRGGAAEATNEIYPGDRLMSVGD 828
                  :..|::::.....|.:|...::|.|.    |:|..|.:||.||.|..|:.|||::::..
Mouse   721 ESSGAIIYTVELKRYGGPLGITISGTEEPFDP----IIISSLTKGGLAERTGAIHIGDRILAINS 781

  Fly   829 RLLQGLELDEAVSILKAMPPGLTRLGICRPLSASDSNSNSNIASP-----LGD 876
            ..|:|..|.||:.:|:.....:| |.|.:...|..::|......|     |||
Mouse   782 SSLKGKPLSEAIHLLQMAGETVT-LKIKKQTDAQSASSPKKFPIPGHSGDLGD 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 20/73 (27%)
PDZ 307..393 CDD:214570 24/94 (26%)
PDZ_signaling 605..680 CDD:238492 24/84 (29%)
PDZ 773..858 CDD:214570 26/84 (31%)
Grip1XP_006514294.1 PDZ_signaling 110..190 CDD:238492 22/79 (28%)
PDZ_signaling 209..292 CDD:238492 27/162 (17%)
PDZ_signaling 307..390 CDD:238492 22/84 (26%)
PDZ_signaling 526..614 CDD:238492 28/98 (29%)
PDZ_signaling 627..711 CDD:238492 18/88 (20%)
PDZ_signaling 727..808 CDD:238492 25/85 (29%)
PDZ_signaling 1058..1138 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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