DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and Pdzk1

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_113900.1 Gene:Pdzk1 / 65144 RGDID:70924 Length:523 Species:Rattus norvegicus


Alignment Length:614 Identity:131/614 - (21%)
Similarity:218/614 - (35%) Gaps:167/614 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DGNGLGFILVGGRST-GVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSSEQVATVLRQTG 81
            :|...||.|...:.| |.:::.:..|..||:.|.|. ||.:|:|..|.:......||..::|::|
  Rat    16 EGQNYGFFLRIEKDTDGHLVRVIEEGSPAEKAGLLD-GDRVLRINGVFVDKEEHAQVVDLVRKSG 79

  Fly    82 AQVRLIVA-RPVEPTAIDYQTLACQAPIIPTKLLSDPEELSRHLFQNPSFATAAVAAAAAAAAAA 145
            ..|.|:|. ......|:.:|.              |.:||.    |:|             ...|
  Rat    80 NSVTLLVLDGDSYEKAVKHQV--------------DLKELD----QSP-------------REPA 113

  Fly   146 GSGSDGDVG-GGGVLDVAS--LVGLVRGGPAEGTELSAVEPQPSAAVLQL--QQLSELAGDLADF 205
            .:....|:| .|||...|.  |..||:.|.:.|..|..::.:....:..:  |.::..||.|||.
  Rat   114 LNEKKPDLGMNGGVETCAQPRLCYLVKEGNSFGFSLKTIQGKKGVFLTDITPQGVAMKAGVLADD 178

  Fly   206 PLPPIPG----GGGHSMVTD--SNAGQRPCPRLDLDIVPFSILSPPPRPALQMLPLETQWRCVQD 264
            .|..:.|    ...|..|.:  :.:|.|         :.|.::..           ||. ||..:
  Rat   179 HLIEVNGENVENASHEEVVEKVTKSGSR---------IMFLLVDK-----------ETA-RCHSE 222

  Fly   265 QNRHIETVIADSKRKLLANEDGGSASASGSGSPDSYMDSPETETYVVELHKNVYGLGITVAGYVC 329
            |....:...|  ..|||.:                     :....|::...|.||.      |:.
  Rat   223 QKTPFKRETA--SLKLLPH---------------------QPRVVVIKKGSNGYGF------YLR 258

  Fly   330 EEEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRN-----TDIVVHL 389
            ...:..|..:|.|..||.||.:| ::.||.:|||:|.|:..:.:...||::||     |.:|:..
  Rat   259 AGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGESVEALDHDSVVEMIRNGGDQTTLLVLDK 322

  Fly   390 TLERFLRGRKYEHLQVALTE------IKGTSAPSGLDRSQDKDQDQESQLSMPGSPSIATLSWLP 448
            ..:|.....::..|....::      :|...||.            .:.|..|||.:...:....
  Rat   323 EADRIYSLARFSPLLYCQSQELPNGSVKEAPAPI------------SAPLEAPGSATTEDVGDHK 375

  Fly   449 PK-------------SLDA-----DSIATEGDEAVDAEYVGISGAEDEFIELPSRDTVESNMSHV 495
            ||             .|:|     .|...|..:...|:..|:.. ||..||:...:..:.....|
  Rat   376 PKLCRLIKEDDSYGFHLNAIRGQPGSFVKEVQQGGPADKAGLEN-EDIIIEVNGENVQDEPYDRV 439

  Fly   496 LDRSDHSGG--------------LTKDQVPRISPIV-PLTNGRSLILADDSGNDTDEQCAEPETE 545
            ::|...||.              ....::|.:|.:. ||..|     .|:.|        |.|.:
  Rat   440 VERIKSSGEHVTLLVCGKVAYSYFQAKKIPILSSLADPLVAG-----PDEKG--------ETEHD 491

  Fly   546 TAQARK-GSKPETERVKDLGDTKTDTDPD 573
            :|::.| .|.|..:|........:....|
  Rat   492 SAESTKDSSHPARDRTLSAASHSSSNSED 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 22/71 (31%)
PDZ 307..393 CDD:214570 26/90 (29%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
Pdzk1NP_113900.1 PDZ_signaling 7..87 CDD:238492 22/71 (31%)
PDZ 132..212 CDD:214570 19/88 (22%)
PDZ_signaling 242..320 CDD:238492 25/84 (30%)
PDZ 375..455 CDD:214570 16/80 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..523 11/55 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.