DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and grip2a

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_017212845.1 Gene:grip2a / 568084 ZFINID:ZDB-GENE-081104-132 Length:1100 Species:Danio rerio


Alignment Length:1018 Identity:193/1018 - (18%)
Similarity:328/1018 - (32%) Gaps:423/1018 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VEVIDLINDGNGLGFILVGG------RSTGVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGF 68
            :||. |..:||..||:|.||      ::..:|:..:.|||.|:|:|.|:.||.:|.:..|.:...
Zfish   188 IEVC-LEKEGNSFGFVLRGGFHEDWHKARPLVVTYVRPGGPADREGTLRAGDRVLSVNGVAVNRQ 251

  Fly    69 SSEQVATVLRQTGAQV---------------------------------------------RLIV 88
            ......|::.|:..:.                                             ::|.
Zfish   252 KHADALTLIMQSSQEAFFLIEYDIMVMDSVQKSSGPLQVDIARSAGSVLGLSLSTSLYRNKQVIT 316

  Fly    89 ARPVEPTAIDYQTLACQAPII----------------PTKLLSDPEELSR-------HLFQN--- 127
            .:.::|.::..:..|..|..|                ..:|||...||::       |..|:   
Zfish   317 IQKIKPASVADRCGALHAGDILLAIDGMSTEHCSLMEAQQLLSSSSELTKLEILPSLHSSQDTVR 381

  Fly   128 -------------------PSF-----------ATAAVAAAAAAAAAAGSG-------------- 148
                               |:|           .|.:..:.::..:|..||              
Zfish   382 VQRSCQRQWDSSENYTNALPAFQKTPSAWSQTTPTPSHRSVSSGVSANTSGFHSYNCGSQSAYPN 446

  Fly   149 ----------------------------------SDGDVGGGG-VLDVASLVGLVRGGPAEG--- 175
                                              :...||.|| |:.:.|...|:||.|..|   
Zfish   447 TYPSSTLPSYPSSPRCSATKRRHRRKEHKSSLSLASSTVGAGGQVVHLESAEVLLRGDPLTGFGL 511

  Fly   176 --------TE-LSA------VEPQPSA---AVLQ-----------------LQQLSELAGDLA-- 203
                    || |||      :||...|   .|||                 |::.::|..|.|  
Zfish   512 QLQGGVFATEPLSAPAAIRFIEPDTPAERCGVLQVGDRILSINGIPTEDGTLEEANQLLRDAALA 576

  Fly   204 ---------DFPLPPIPGGG--------------GHSMVTDSNAGQRPCPRLDLDIVPFSI---- 241
                     |.....||..|              |.::.....||:   |.:..:|...||    
Zfish   577 NKIALEVEFDVAESVIPSSGTFQVKLPKRRGVELGITISASKKAGK---PLIISEIQKGSIAHRI 638

  Fly   242 --LSPPPRPALQMLPLETQWRCVQDQNRHIETVI-----ADSKRKLLANEDGGSASASGSGSPDS 299
              |.|..|    :|.::.    |:..|..:|..:     |:...||...:|..:...        
Zfish   639 GTLEPGDR----LLAIDN----VRLDNCGMEEAMMVLQQAEGMVKLRIQKDEDNLDE-------- 687

  Fly   300 YMDSPETETYVVELHKNVYGLGITVAGYVCEEEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVD 364
             ::|..:..:.|||.::...||||::|   .||..:.|.:.|:.....|..:|.:.|.||::|::
Zfish   688 -LESSGSVIFTVELKRHGGPLGITISG---TEEPFNPILISSLTRNGLAHRTGALHIGDRVLAIN 748

  Fly   365 GRSLSGVTNHQAVELLRNTDIVVHLTLER------------------------------FLRGRK 399
            ..||.|....:|:.||:.....|.|.:::                              |.|| |
Zfish   749 NMSLKGKPLSEAIHLLQTAGDTVTLKIKKRSDPLLDSERGSPSRTASCVSDMEDDRSDSFRRG-K 812

  Fly   400 YEHLQVALTEIKGTSAPSGLDRSQDKDQDQESQLSMPGSPSIATLSWLPPKSLDADSIATEGDEA 464
            |..|      ::.|:.|| ||.:.|                    ||        ||      .|
Zfish   813 YSDL------LRQTTPPS-LDSAMD--------------------SW--------DS------SA 836

  Fly   465 VDAEYVGISGAEDEFIELPSRDTVE-------SNMSHVLDR------SDHSGGLTKDQVPRISPI 516
            :||.|    |::..:|..||..|:.       ::.|.::.|      :.:.|.|:::.......:
Zfish   837 LDAGY----GSQGVYIHRPSDFTLHPSDWRQTNHRSPLMSRRPAHRPTVYDGRLSEEDWTYSGSV 897

  Fly   517 VPL------------------------TNGRSLILAD-----------DSGNDTDEQCAEPETET 546
            .|.                        |.|:|.||.:           ..|.|.::| .|.:|:.
Zfish   898 SPACGHNYNSTTDAQENYWSQALQDLETCGQSEILRELEATIMSGSTLSLGEDFEKQ-NESKTKF 961

  Fly   547 AQARKGSKPETERVKDLGDTKTDTDPDPDLDPGQMPTPTNEAPVKAASPTAASLRVAWKSLGISL 611
            .:.    .||        :|..:|..|...:...:|...::..::..:.:        :..|.|:
Zfish   962 LEL----SPE--------NTSVNTPEDLKENSPSVPLELHKICIQKDADS--------RDFGFSV 1006

  Fly   612 EGTVDVECGIEKRPHHYIRSILADGPVGRQGILRPGDELLQVNEHKLQGLRHIEVVKILKELPAR 676
            ...: :|.|:      |:..|..|||..:.| |||.|.:||||..:.:.......|.::.|....
Zfish  1007 SDGL-LEKGV------YVNMIRPDGPADQAG-LRPYDRILQVNHARTRDFDCCLAVPLITEAGEN 1063

  Fly   677 VKLVCARGTHVPSVINTSQNPEA----FETRSLLPGGHQSLQN 715
            ::||.:|            ||.|    :..:.......||.||
Zfish  1064 LQLVISR------------NPLAQAHDWPPKDCQDTSQQSAQN 1094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 22/122 (18%)
PDZ 307..393 CDD:214570 26/85 (31%)
PDZ_signaling 605..680 CDD:238492 20/74 (27%)
PDZ 773..858 CDD:214570
grip2aXP_017212845.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.