DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and grid2ipb

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_009304908.1 Gene:grid2ipb / 559717 ZFINID:ZDB-GENE-040724-161 Length:1383 Species:Danio rerio


Alignment Length:844 Identity:170/844 - (20%)
Similarity:261/844 - (30%) Gaps:293/844 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GFILVGGRSTGVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSSEQVATVLRQTGAQVRLI 87
            ||.|.|  ...|.|.::.||..||..| |:.||.:|.:..:::|..|.|:|.::|:.:||...|:
Zfish   347 GFTLRG--HAPVWIDSVMPGSPAEACG-LKTGDRILFLNGLDMRNCSHEKVVSMLQGSGAMPSLV 408

  Fly    88 VARPVEPTAIDYQTLACQAPIIPTKLLSDPEELSRHLFQNPSFATAAVAAAAAAAAAAGSGSDGD 152
                ||...:||.    |:.       |:|||       .||...:...|.::....|       
Zfish   409 ----VEEGPVDYP----QSD-------SEPEE-------TPSAPRSRSPALSSLQWVA------- 444

  Fly   153 VGGGGVLDVASLVGLVRGGPAEGTELSAVEPQPSAAVLQLQQLSELAGDLADFPLPPIPGGGGHS 217
                     ..|...:|   ..|...|    |....:|.||:...:...|..|            
Zfish   445 ---------EILPPSIR---VHGRTFS----QQLEHLLTLQERYTICKALETF------------ 481

  Fly   218 MVTDSNAGQRPCPRLDLDIVPFSILSPPPRPAL-----QMLPLETQWRCVQDQNRHIETVIADSK 277
                  ...|....|.:|:.|  :|..|.:..:     |:|..|.|..|.....|.:....|:.:
Zfish   482 ------FQHRNVDTLIVDVFP--VLDTPAKQLIWQFIYQLLTYEEQEHCKTKIARFLGFKSAEPE 538

  Fly   278 RKLLANEDGGSASASGSGSPDSYMDSPETETYVVELHKNVYGLG-----ITVAGYVC-------E 330
            .....:....|...||:...::..:. .::..::..|   .|:|     :|.....|       |
Zfish   539 VGAETHRRSSSMRVSGTSHKNTVRER-SSDDCIIGTH---LGMGTFTDPVTPEERQCGDGTSFPE 599

  Fly   331 EEDLS---GIF--------VKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRNTD 384
            ..|||   |::        |||       ..|.|...:.|...:.....:..|.........|..
Zfish   600 SPDLSHMTGVYTELGNVYPVKS-------SQSLQSHSSPRAAGMGLAESNTYTQSFTHSTAGNRK 657

  Fly   385 IVVHLTLERFLRGRKYEHLQVALTEIKGTSAPSGLDRSQDKDQDQESQLSMPGSP---------- 439
            ..:.||......|.::|..|      :..::|..:|.:.....|     |.|.||          
Zfish   658 SGLSLTWTDSFPGPQFETYQ------QTVASPDSVDSNPYVSLD-----SPPASPLPSDELSPLP 711

  Fly   440 ---SIATLSWLPPKSLDADSIATEGDEAVDA--EYVG--------ISGAEDEFIELPSRDTVESN 491
               .:.|.| .||:|.|.|..       :||  |.:|        ..|.|:::.|:..:|..|.|
Zfish   712 QRRKLFTFS-RPPRSRDTDKF-------LDALSEQLGHRVNIVDDFKGGENDYEEMSFQDEQEVN 768

  Fly   492 M-SHVLDRS---DHSGG---------------------------------------LTKDQVPR- 512
            | .|.|..:   |||..                                       :|.:.:|: 
Zfish   769 MLPHELSSASSEDHSSSDDSTSVSYSSGSDHIPPPPQSPPPPPPPLQFTDSPSPLPITPEHLPQP 833

  Fly   513 ---------ISPIVP-----LTNGRSL-------------------------------------- 525
                     |:|..|     |.|..||                                      
Zfish   834 PPAFQHHPIIAPPPPPPRPFLANRPSLHKVLPTREELRAQHSHPRRSSPQPSSQPILQLHQPKAH 898

  Fly   526 -ILADD----------SGNDT-----------DEQCAEPETE---TAQARKGSKPETERVKDLGD 565
             ||...          |...|           .:|...|.|.   |.|....|:|..:..:....
Zfish   899 PILQSSPHTSPQPPHTSAQHTRLQHPSQSIYQSQQTTVPRTSPSLTKQKSLHSQPSQQSFEGTLS 963

  Fly   566 TKTDTDPDPDLDPGQMPTPTNEAPVKAASPTAASL-RVAWKSLGISLEGTVDVECGIEKRPH--- 626
            :|....|.|.|.|...|.|..:...||:.....|: |:.|:.:..| |||:..:.|.:...|   
Zfish   964 SKVPPPPPPPLPPPCDPPPLPKPSPKASDNNHMSVKRLRWEQVENS-EGTIWGQLGDDPDYHKLS 1027

  Fly   627 ---HYIRSILADGPVGRQGILRPGDELLQVNEHKLQGLRHIEVVKILKE--------LPARVKL 679
               .|:...|..| ..|..|..|....|..|      |:..:||:||..        |.|.:||
Zfish  1028 DMVKYLDLDLYFG-TQRNSISLPEPTFLPEN------LKKKDVVEILSHKKAYNASILIAHLKL 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 23/65 (35%)
PDZ 307..393 CDD:214570 20/108 (19%)
PDZ_signaling 605..680 CDD:238492 23/89 (26%)
PDZ 773..858 CDD:214570
grid2ipbXP_009304908.1 PDZ_signaling 9..69 CDD:238492
PDZ_signaling 80..156 CDD:238492
HN_L-delphilin-R1_like 183..262 CDD:259820
PDZ_signaling 335..410 CDD:238492 23/69 (33%)
HN_L-delphilin-R2_like 451..530 CDD:259821 21/105 (20%)
FH2 995..1360 CDD:280362 26/98 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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