DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and grip1

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_009298419.1 Gene:grip1 / 558006 ZFINID:ZDB-GENE-041210-125 Length:1191 Species:Danio rerio


Alignment Length:1039 Identity:204/1039 - (19%)
Similarity:326/1039 - (31%) Gaps:407/1039 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WSQVEVIDLINDGNGLGFILVGG------RSTGVVIKALTPGGVAERDGRLQLGDHLLQIGEVNL 65
            :..||| .|..:||..||::.||      :|..|.|..:.|||.|:|:|.::.||.||.|..:.|
Zfish   174 FKNVEV-TLHKEGNTFGFVIRGGAHEDRNKSRPVTITTIRPGGPADREGTIKPGDRLLSIDGIRL 237

  Fly    66 RGFSSEQVATVLRQTGAQVRLIV------------------------------------------ 88
            .|.|..:..::|:|.|.:..|::                                          
Zfish   238 HGASHAEAMSILKQCGQEATLLIEYDVSVMDSVATASGPLLVEVAKSMGSSLGLALSTSMYCNKQ 302

  Fly    89 ------ARP------------------VEPTAIDYQTLA------------CQAPIIP---TKL- 113
                  .:|                  |:.|:::|.|||            .:..|:|   |:| 
Zfish   303 VIIIDKVKPASIADRCGALHAGDHILSVDGTSMEYCTLAEATQLLASASEHVKMEILPHHQTRLA 367

  Fly   114 LSDPEEL-----SRHL--------------FQ--------------------NP----SFATAAV 135
            |..||.:     :|.|              :|                    ||    ||:..::
Zfish   368 LKGPEHVKVQRSTRPLPWESGTNNNSNFLPYQHYNTYHPDQSHSQAKKTSPSNPPLGSSFSPTSM 432

  Fly   136 AA----------------------------------------AAAAAAAAGSG-----------S 149
            :|                                        |::....||..           |
Zfish   433 SAYSLSSLNMNTLPRTMYPTSPRGTMMRRKLKKKDYKSSMSLASSTVGLAGQVVHTETTEVTLIS 497

  Fly   150 DGDVGGG-------------------------------GVLDVASLVGLVRGGPAEGTELSAVEP 183
            |..:|.|                               |:|.:...:..:.|.|.|.:.|.....
Zfish   498 DSIMGFGIQLQGGVFATETLSSPPLIAYIDPDSPAERCGILQIGDRILSINGIPTEDSTLEETNQ 562

  Fly   184 QPSAAVLQLQQLSELAGDLADFPLPPIPGGGGHSMVTDSNAGQRPCPRLDLDIVPFSILSPPPRP 248
            ....:.:..:...|:..|:|:..:|  ..|..|..:...       |.::|.|...|..|..|..
Zfish   563 LLRDSSITSKVTLEIEFDVAESVIP--SSGTFHVKLPKK-------PGVELGITISSPSSRKPGD 618

  Fly   249 ALQMLPLE-------TQWRCVQDQNRHIETVIADS-----------------KRKLLANEDGGSA 289
            ||.:..::       |....:.|:...|:.:..|:                 |.|:..:||....
Zfish   619 ALIISDIKKGSVAHRTGTLELGDKLLAIDNIRLDNCSMEDAVQILQQCEDLVKLKIRKDEDNSGV 683

  Fly   290 SASGSGSPDSYM------DSPETE---TYVVELHKNVYG--LGITVAGYVCEEEDLSGIFVKSII 343
            ..:||...::.:      |..||.   .|.|||.:  ||  ||||::|   .||....|.:.|:.
Zfish   684 LRAGSVDRNARVLLACVADEQETSGAIIYTVELKR--YGGPLGITISG---TEEPFDPIIISSLT 743

  Fly   344 EGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRNTDIVVHLTLERFLR------------ 396
            :|..||.:|.|.|.|||:|::..||.|....:|:.||:.....|.|.:::...            
Zfish   744 KGGLAERTGAIHIGDRILAINSNSLKGKPLSEAIHLLQMAGESVTLKIKKQGELPSPKPPSVTGR 808

  Fly   397 ----------GRKYEHLQ-------------------VALTEIKGTSAPSGLDRSQDKDQDQESQ 432
                      |:|...|.                   .|:.....|.||:|...|.......|.:
Zfish   809 LNNLSDLEDDGQKAGKLSDIYSTTIPSVDSAVESWDGSAIDATFSTQAPTGFQASGYSFHSHEWR 873

  Fly   433 LSMP--GS--------------------------PSIATLSWLPPKSLDADSIATEGDEAV---- 465
            .:.|  ||                          ||.:..|.| |..|.:||..|.|.:..    
Zfish   874 NAKPSRGSLSPVNSSRQRNNILPDFGIGVDDWDRPSASGASTL-PTGLISDSRFTVGHDGTEPDQ 937

  Fly   466 ----------DAEYVGISGAEDEFIELPSRDTVESNMSHVLD-RSDHSGGLTKDQVPRISPIVPL 519
                      |.|..|.||...|..:.|.|...:.|::.:.. .|..|..|..|..|..|.:   
Zfish   938 EENFWSQALEDLETCGQSGILRELEDKPDRLLNKRNLAILATIMSGSSLSLNHDPAPTRSHL--- 999

  Fly   520 TNGRSLILADDSGNDTDEQCAEPETETAQARKGSKPET-------------ERVKDLGDTKTDTD 571
              ||.....:...|         :.:.:||.:.:...|             :.:||:        
Zfish  1000 --GRQASFQERGSN---------KPQYSQANRSNTLPTDVGRKAFAMRRMKQEIKDI-------- 1045

  Fly   572 PDPDLDPGQMPTPTNEAPVKAASPTAASLRVAWKSLGISLEGTVDVECGIEKRPHHYIRSILADG 636
                    ..|||.....|.....:..      :..|.|:...| :|.|:      |:.:|...|
Zfish  1046 --------MSPTPVELHKVSLLKDSDL------EDFGFSVSDGV-LEKGV------YVNNIRPGG 1089

  Fly   637 PVGRQGILRPGDELLQVNEHKLQGLRHIEVVKILKELPARVKLVCARG--THVPSVINTSQNPE 698
            | ...|.|:|.|.|||:|..:.:......||.::.|...::.||.:|.  :..||.:|...|.|
Zfish  1090 P-AEIGGLKPYDRLLQINHVRTRDFDCCLVVPLIAESGNKLDLVISRNPVSSQPSELNPLSNDE 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 27/125 (22%)
PDZ 307..393 CDD:214570 33/90 (37%)
PDZ_signaling 605..680 CDD:238492 20/74 (27%)
PDZ 773..858 CDD:214570
grip1XP_009298419.1 PDZ_signaling 79..159 CDD:238492
PDZ_signaling 178..261 CDD:238492 30/83 (36%)
PDZ_signaling 276..359 CDD:238492 7/82 (9%)
PDZ_signaling 490..578 CDD:238492 11/87 (13%)
PDZ_signaling 591..675 CDD:238492 15/90 (17%)
PDZ_signaling 711..792 CDD:238492 33/85 (39%)
PDZ_signaling 1053..1133 CDD:238492 22/93 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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