DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15803 and SYNJ2BP

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_060843.2 Gene:SYNJ2BP / 55333 HGNCID:18955 Length:145 Species:Homo sapiens


Alignment Length:116 Identity:38/116 - (32%)
Similarity:55/116 - (47%) Gaps:18/116 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 VELHKNVYGLGITVAG-----YVCEEEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSG 370
            :.|.:...|||..:.|     ||..:   |||:|..|.|..||...|::|..|:|::|:|:.|..
Human    14 INLTRGPSGLGFNIVGGTDQQYVSND---SGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKN 75

  Fly   371 VTNHQAVELLRNTDIVVHLTLERFLRGRKYEHLQVALTEI--KGTSAPSGL 419
            :.:..||:|.||....|.|        |....|||....|  :|...|||:
Human    76 LLHQDAVDLFRNAGYAVSL--------RVQHRLQVQNGPIGHRGEGDPSGI 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492
PDZ 307..393 CDD:214570 29/86 (34%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
SYNJ2BPNP_060843.2 PDZ_signaling 13..97 CDD:238492 30/93 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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