DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and PDZK1

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_024303384.1 Gene:PDZK1 / 5174 HGNCID:8821 Length:539 Species:Homo sapiens


Alignment Length:625 Identity:134/625 - (21%)
Similarity:213/625 - (34%) Gaps:188/625 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVLSTEWSQV----EVIDLINDGNGLGFILVGGRST-GVVIKALTPGGVAERDGRLQLGDHLLQI 60
            :||:||.:..    |......:|...||.|...:.| |.:::.:.....||:.| ||.||.:|:|
Human    15 LVLTTEMTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPAEKAG-LQDGDRVLRI 78

  Fly    61 GEVNLRGFSSEQVATVLRQTGAQVRLIVA-----RPVEPTAIDYQTLACQAPIIPTKLLSDPEE- 119
            ..|.:......||..::|::|..|.|:|.     .....|.:|.:.|.          .|..|: 
Human    79 NGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKAVKTRVDLKELG----------QSQKEQG 133

  Fly   120 LSRHLFQNPSFATAAVAAAAAAAAAAGSGSDGDVGGGGVLDVAS--LVGLVRGGPAEGTELSAVE 182
            ||.::.                         ..|..|||.....  |..||:.|.:.|..|..|:
Human   134 LSDNIL-------------------------SPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQ 173

  Fly   183 PQPSAAVLQL--QQLSELAGDLADFPLPPIPG----GGGHSMVTD--SNAGQRPCPRLDLDIVPF 239
            .:....:..:  |.::..||.|||..|..:.|    ...|..|.:  ..:|.|         |.|
Human   174 GKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSR---------VMF 229

  Fly   240 SILSPPPRPALQMLPLETQWRCVQDQNRHIETVIADSKR----KLLANEDGGSASASGSGSPDSY 300
            .::..                  :...||:|..|...:.    |||.::                
Human   230 LLVDK------------------ETDKRHVEQKIQFKRETASLKLLPHQ---------------- 260

  Fly   301 MDSPETETYVVELHKNVYGLGITVAGYVCEEEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDG 365
               |.    :||:.|...|.|.    |:....:..|..:|.|..||.||.:| ::.||.:|||:|
Human   261 ---PR----IVEMKKGSNGYGF----YLRAGSEQKGQIIKDIDSGSPAEEAG-LKNNDLVVAVNG 313

  Fly   366 RSLSGVTNHQAVELLR----NTDIVV-------HLTLERFLRGRKYEHLQVALTEIKGTSA--PS 417
            .|:..:.:...||::|    .|.::|       ...|..|.....|:..::....:|...|  |:
Human   314 ESVETLDHDSVVEMIRKGGDQTSLLVVDKETDNMYRLAHFSPFLYYQSQELPNGSVKEAPAPTPT 378

  Fly   418 GLDRSQDKDQDQESQLSMPGSPSIATLS--------------WLPPKSLDADSIATEGDEAVDAE 468
            .|:.|...|..:|    :...|.:..|:              .||      .|...|..:...|:
Human   379 SLEVSSPPDTTEE----VDHKPKLCRLAKGENGYGFHLNAIRGLP------GSFIKEVQKGGPAD 433

  Fly   469 YVGISGAEDEFIELPSRDTVESNMSHVLDRSDHSGGLTKDQVPRISPIVPLTNGRSLILADDSGN 533
            ..|:.. ||..||:...:.::.....|:||...||                            .|
Human   434 LAGLED-EDVIIEVNGVNVLDEPYEKVVDRIQSSG----------------------------KN 469

  Fly   534 DTDEQCAEPETETAQARKGSKPETERVKDLGDTKTDTDPD 573
            .|...|.:...:..||:|     ...|..|.| ..||.||
Human   470 VTLLVCGKKAYDYFQAKK-----IPIVSSLAD-PLDTPPD 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 22/72 (31%)
PDZ 307..393 CDD:214570 27/96 (28%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
PDZK1XP_024303384.1 PDZ_signaling 27..107 CDD:238492 23/80 (29%)
PDZ 152..232 CDD:214570 21/88 (24%)
PDZ_signaling 261..340 CDD:238492 26/87 (30%)
PDZ 395..475 CDD:214570 19/114 (17%)
F1-ATPase_gamma <457..>501 CDD:320933 15/77 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.