DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and Grip

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster


Alignment Length:939 Identity:201/939 - (21%)
Similarity:339/939 - (36%) Gaps:255/939 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVLSTEWSQ----VEVIDLINDGNGLGFILV----------GGRST-----------GVVIKALT 40
            :|.|.|:|.    :|:...:||  .||.:|.          .|.||           ||.|.::.
  Fly   268 VVQSVEFSMGPLLIEIERPMND--KLGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASIL 330

  Fly    41 PGGVAERDGRLQLGDHLLQIGEVNLR--GFSSEQVATVL-RQTG---AQVRLIVARPVEPTAIDY 99
            |..:|:|.|.|.:||.:|.|.:..:.  .||.::|.|:| ..||   .|::::.|..:....  :
  Fly   331 PASIADRCGALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQIMPAHALARRG--H 393

  Fly   100 QTLACQAPIIPTKLLSDPEELSRHLFQNPSFATAAVAAAAAAAAAAGSGSDGDVGGGGVLDVASL 164
            .||........|..........|   |...||..:.......|......:.|.:|.||:...:||
  Fly   394 TTLGSPKYSFSTLESRKSSTAGR---QRQRFARKSSLPLENPACGTPGSTGGSMGTGGIHGSSSL 455

  Fly   165 ---VGLVRGGPAEGTELSAVEPQPSAAVLQLQQLSELAGDLADFPLPPIPGGGGHSMVTDSNAGQ 226
               :||.|   ||...: .::....|.::    |||           .:.|.||...|..:    
  Fly   456 GMGLGLCR---AESFPV-LLDCSHGAGII----LSE-----------TVSGSGGSGAVAIA---- 497

  Fly   227 RPCPRLDLDIVPFSILSPPPRPALQMLPLETQWRCVQDQNRHIE-----TVIADSKRKLLANEDG 286
                    .|||.|:..              :..|:|..:|.:.     ::.|.:.|:||  |.|
  Fly   498 --------QIVPDSVAD--------------RSGCIQAGDRIVAINKMYSLDAAAMRQLL--EGG 538

  Fly   287 GSASASGSGSPDSYMD-----------SPETETYVVE-LHKNVYGLGITVAGYVCEEEDLSGIFV 339
            .|.:.:.:|:|.::::           .|.:..:.|: |.....|||::|:|     ....|:.:
  Fly   539 SSRNGASNGTPANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSG-----SSHGGLVI 598

  Fly   340 KSIIEGSAAETSGQIQINDRIVAVD----------------GRSLSGVTNHQAVELLRNTDIVVH 388
            ..:..||.|..||.::..|.::|||                |||.:  .:|.:.:.       ..
  Fly   599 SDVKMGSPAHRSGSLRSGDILLAVDQHPVQHFNVDALLKEEGRSQN--PSHSSSDF-------TT 654

  Fly   389 LTLERFLRGRKYEHLQVALTEIKGTSAP-------SGLDRSQDKDQDQESQLSMPGSPSIATLSW 446
            ||::|           :.|.:....|:|       ||::            |.|....|.:|   
  Fly   655 LTIKR-----------IVLPDFLPMSSPIYSNCPASGIN------------LGMGMGVSTST--- 693

  Fly   447 LPPKSLDADSIATEGDEAVDAEYVGISGAEDEFIELPSRDTVESNMSHVLDRSDHSGGLTKDQVP 511
              ...|.:.:..|.|..| |...:.....:.::..:||.|........:...|..:||  .....
  Fly   694 --DHDLYSSAYVTAGKYA-DCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGSGSNGG--NQAAN 753

  Fly   512 RISPIVPLTNGRSLILADDSGNDTDEQCAEPETETAQARKGSKPETERVKDLGDTKTDTDPDPDL 576
            ..|..|   |.||.:...::.:.|.|.   ||.|..|.:.....|..|.             ..:
  Fly   754 SWSTGV---NSRSYVAPPNTQSLTTEL---PEEEDEQEQMYPGYELNRY-------------ASV 799

  Fly   577 DPGQMPTP-TNEAPVKAASPTAAS-----------LRVAWKS--LGISLEGTVDVECGIEKRPHH 627
            |...:|.| .|:....|||.::.|           :|:..|.  |||:|.|:.|:...|.     
  Fly   800 DCTALPPPMENKVYGSAASSSSKSSGSSLHQIIFTVRLEPKGGLLGITLAGSEDITKSIT----- 859

  Fly   628 YIRSILADGPVGRQGILRPGDELLQVNEHKLQGLRHIEVVKILKELPARVKLV------CARGTH 686
             |..::..|...:.|.:..||:||.::||.:||:.......:|:.|...|.|.      .|.|:|
  Fly   860 -ISGLVEGGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSH 923

  Fly   687 VPSVINTSQNPEAFETRSLLPGGHQSLQNLLSKAQSESSLYTSSTATLTDAGAAAGGSGGTAGGG 751
            :|..                       |.:.:|.|......:::|....::|:.....||...|.
  Fly   924 LPQT-----------------------QAIYAKVQRRPRSPSANTEASKESGSGNANGGGAVNGN 965

  Fly   752 ARSKSLENVSGLALWSCEVTAVDIEKTEQGFGFSILDYQDPLDSEGSVIVIRGLIRGGAAEATNE 816
            :.| ....|..:.|:.        :|....:|||:   .|.|...|  :.|..:..||.|:....
  Fly   966 SGS-GKPRVFHVTLYK--------DKVYDDYGFSV---SDGLYERG--VFINRIRSGGPADMCGL 1016

  Fly   817 IYPGDRLMSVGDRLLQGLELDEAVSILKA 845
            :.|.||:|.|.:...|..:....|.::.|
  Fly  1017 LKPFDRIMQVNEMKTQDFDCCLTVPLIAA 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 28/98 (29%)
PDZ 307..393 CDD:214570 23/102 (23%)
PDZ_signaling 605..680 CDD:238492 22/76 (29%)
PDZ 773..858 CDD:214570 19/73 (26%)
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492 27/98 (28%)
PDZ 496..>521 CDD:294084 7/50 (14%)
PDZ_signaling 571..658 CDD:238492 23/100 (23%)
PDZ_signaling 832..913 CDD:238492 24/86 (28%)
PDZ_signaling 973..1055 CDD:238492 21/86 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.