DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and CG10939

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_524712.1 Gene:CG10939 / 44155 FlyBaseID:FBgn0010620 Length:296 Species:Drosophila melanogaster


Alignment Length:317 Identity:59/317 - (18%)
Similarity:104/317 - (32%) Gaps:97/317 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   581 MPTPTNEAPVKAASPTAASLRVAWKSLGISLEGTVDVECGIEKRPH----------------HYI 629
            |.|||  :|.....||              |...|...|.|.|||.                .:|
  Fly     1 MSTPT--SPKTPTPPT--------------LPPGVTKTCHIVKRPDFDGYGFNLHSEKVKPGQFI 49

  Fly   630 RSILADGPVGRQGILRPGDELLQVNEHKLQGLRHIEVVKILKELPARVKLVCARGTHVPSVINTS 694
            ..:.||.|....| |:.||.:|:||...:....|.:||..:|.:...|:|:         :|:. 
  Fly    50 GKVDADSPAEAAG-LKEGDRILEVNGVSIGSETHKQVVARIKAIANEVRLL---------LIDV- 103

  Fly   695 QNPEAFETRSLLPGGHQSLQNLLSKAQSESSLYTSSTATLTDAGAAAGGSGGTAGGGARSKSLEN 759
             :.:|.|.:...|                             ..||..|:|..:..|......|.
  Fly   104 -DGKALEVKPASP-----------------------------PAAACNGNGSASQNGYEGTKQEM 138

  Fly   760 VSGLALWSCEVTAVDIEKTEQGFGFSILDYQDPLDSEGSVIVIRGL--IRGGAAEATNEIYPGDR 822
            ...    |..::::.:..|::....|.:.....:::....:|.||:  :....|.....:..|.:
  Fly   139 PGA----SANISSISMVSTKRSSNASSIQSGSTMNASDLDVVDRGIPAVAAPVAITPPPVQNGSK 199

  Fly   823 LMSVGDRLLQGLELDEAVSILKAMPPGLTRLGICRPLSASDSNSNSNIASPLGDSTS 879
            ..|         .::....:....||..|:.||         |:|.::.:..|:.|:
  Fly   200 PSS---------PINNNTLMSTPPPPSATKAGI---------NNNGSVYNTNGNGTN 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492
PDZ 307..393 CDD:214570
PDZ_signaling 605..680 CDD:238492 23/90 (26%)
PDZ 773..858 CDD:214570 13/86 (15%)
CG10939NP_524712.1 PDZ_signaling 20..101 CDD:238492 22/90 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.