DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and Patj

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:896 Identity:310/896 - (34%)
Similarity:431/896 - (48%) Gaps:231/896 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STEWSQVEVIDLINDGNGLGFILVGGRSTGVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGF 68
            :|:::|::.|:|:|||.||||.::|.|::||::|.:.|||||::||||:.|||:||||:|||...
  Fly   141 ATDYAQIQAIELVNDGTGLGFGIIGARNSGVIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEM 205

  Fly    69 SSEQVATVLRQTGAQVRLIVARPVEPTAIDYQ-TLACQAPIIPTKLLSDPEELSRHLFQNPSFAT 132
            .|||||.||||:|..|||:||||||.:....| .|.....::||::|.||.||.|:|...     
  Fly   206 VSEQVAAVLRQSGTHVRLVVARPVEQSVPTPQYALEPGTAVVPTRVLVDPAELERYLIST----- 265

  Fly   133 AAVAAAAAAAAAAGSGSDGDVGGGGVLDVASLVGLVRGGP-AEGTELSAVEPQPSAAVLQLQQLS 196
                                                 |.| ..|...:|..||.:....:.....
  Fly   266 -------------------------------------GYPEIFGESSTASTPQTTTEDDRFVYRG 293

  Fly   197 ELAGDLADFPLPPIPGGGGHSMVTDSNAGQRPCPRLDLDIVPFSILSPPPRPALQMLPLETQWRC 261
            |.                  ||:.|        |.:||:                          
  Fly   294 ET------------------SMLID--------PNIDLE-------------------------- 306

  Fly   262 VQDQNRHIETVIADSKRKLLANEDGGSASASGSGSPDSYMDSPETETYVVELHKNVYGLGITVAG 326
                             :|||                    .||||...|||.|:..|||||:||
  Fly   307 -----------------ELLA--------------------LPETEKLQVELKKDANGLGITIAG 334

  Fly   327 YVCEEEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRNTDIVVHLTL 391
            ||||:|:||||||||:..||||:.||:|::||||:.|||:||.|.:||||||||:.:..||:|.|
  Fly   335 YVCEKEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVVNLRL 399

  Fly   392 ERFLRGRKYEHLQVALTEIKGTSAPSGLDRSQDKDQDQESQLSMPGSPSIATLSWLPPKSLDADS 456
            ||:|||.|:|.||.|:.  .....||                |.||:||.|.   :|.......|
  Fly   400 ERYLRGPKFEQLQQAIA--ANDKLPS----------------SAPGTPSRAP---MPTPVATTSS 443

  Fly   457 IATEGDEAVDAEYVGISGAEDEFIELP-------------SRDTVES-----NMSHVLDRSDHSG 503
            ..|....::..|      .|:|.:..|             :..|:.|     .:..|.|..|   
  Fly   444 ATTTPSRSITRE------LEEEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLD--- 499

  Fly   504 GLTKDQVPRISPIVPLTNGRSLILADDSGNDTDEQCAEPETETAQARKGSKPETERVKDLGDTKT 568
            |.||.....:.|:...|..::..:.......||.:.:: :.||...||..|.....|:.:     
  Fly   500 GSTKIIPTEVVPLADKTEAKNSGVITRHKYYTDPELSD-DAETEIIRKWQKIVGSDVEVI----- 558

  Fly   569 DTDPDPDLDPGQMPTPTNEAPVKAASPTAASLRVAWKSLGISLEGTVDVECGIEKRPHHYIRSIL 633
                              .|.:|         :.|...||||||||||||.|.|.||||||||||
  Fly   559 ------------------VAQIK---------KFAVGGLGISLEGTVDVEGGREVRPHHYIRSIL 596

  Fly   634 ADGPVGRQGILRPGDELLQVNEHKLQGLRHIEVVKILKELPARVKLVCARGTHVPSVINTSQNPE 698
            .|||||..|:||.|||||:||..:|.|:.|:|||.||||||..|::||.|..      |:|..|.
  Fly   597 PDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVVAILKELPLDVRMVCGRNR------NSSLLPF 655

  Fly   699 AFETRSLLPGGHQSL---QNLLSKAQSESSLYTSSTATLTDAGAAAGGSGGTAGGGARSKSLENV 760
            :.:|...|....::|   .:.|.||:|:.||.|:.:....|:.|||..|...    .:|:|||.:
  Fly   656 SDDTLKKLSNNFENLLPATDRLVKAKSDGSLATAGSVADGDSVAAAAASFSK----LKSRSLEPL 716

  Fly   761 SGLALWSCEVTAVDIEKTEQGFGFSILDYQDPLDSEGSVIVIRGLIRGGAAEATNEIYPGDRLMS 825
            :|||:||.:...:::.|.::|.||||||||||||...::||||.|:.||.|:....:.|||||:.
  Fly   717 TGLAMWSSQPQIIELVKGDRGLGFSILDYQDPLDPNDTLIVIRSLVPGGVAQLDGRLIPGDRLLF 781

  Fly   826 VGDRLLQGLELDEAVSILKAMPPGLTRLGICRPLSASDSN----SNSNIAS 872
            |....|:...||:||..||....|:.|:|:.:||..:|::    ||::..|
  Fly   782 VNSINLENASLDQAVQALKGASKGVVRIGVAKPLPMTDNSLKACSNASTTS 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 44/71 (62%)
PDZ 307..393 CDD:214570 54/85 (64%)
PDZ_signaling 605..680 CDD:238492 52/74 (70%)
PDZ 773..858 CDD:214570 38/84 (45%)
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 44/71 (62%)
PDZ_signaling 318..400 CDD:238492 52/81 (64%)
PDZ_signaling 557..643 CDD:238492 55/117 (47%)
PDZ_signaling 726..807 CDD:238492 36/80 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I8454
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I4782
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245941at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103252
Panther 1 1.100 - - P PTHR19964
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1763
76.960

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