DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and a

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster


Alignment Length:684 Identity:137/684 - (20%)
Similarity:212/684 - (30%) Gaps:230/684 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSSEQVATVLRQTGAQV----RLIVARPVEPT 95
            :|..|.|.|:|::||||:|||.::.:...:|||..|  .|.|.|...:.|    .|::|.....|
  Fly   809 LIVELEPYGMAQKDGRLRLGDEIVNVNGKHLRGIQS--FAEVQRLLSSFVDNCIDLVIAHDEVTT 871

  Fly    96 AIDYQTLACQAPIIPTKLLSDPEELSRHLFQNPSFATAAVAAAAAAAAAAGSGSDGDVGGGGVLD 160
            ..|:.          ||:..|.....||                                     
  Fly   872 VTDFY----------TKIRIDGMSTQRH------------------------------------- 889

  Fly   161 VASLVGLVRGGPAEGTELSAVEPQPSAAVLQLQQLSELAGDLADFPLPPIPGGGGHSMVTDSNA- 224
                            .||.|:...|...|...|..:|..:...          ||:...:..| 
  Fly   890 ----------------RLSYVQRTQSTDSLSSMQSLQLQQERIQ----------GHNTEQEQEAQ 928

  Fly   225 GQRPCPRLDLDIVPFSILSPPPRPALQMLPLETQWRCVQDQNRHIETVIADSKRKLL---ANEDG 286
            |:..|....:..|.   ..|.|.|.:|.....|.        ||...|.| .:.:||   |....
  Fly   929 GEDQCDARSMASVS---TMPTPMPLMQHRRSSTP--------RHSLDVGA-PEHELLRRRARSSS 981

  Fly   287 G-------------SASASGSGSPDSYM----DSPETETYVVELHKNVY---GLGITVAGYVCEE 331
            |             |.|:|.|.||:..:    :.|..:|   :.:..||   ...:.||..:.::
  Fly   982 GQRSLALTPTPLFASGSSSCSSSPNHRLLDNENDPANDT---DSYTPVYANRAASVCVASSLADD 1043

  Fly   332 EDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRNTDIVVHLTLERFLR 396
            |....:..|...||||            :.|.......|...|.|    ||:   ::|....: |
  Fly  1044 EKWQLLARKRCSEGSA------------LSATPNPQQFGQRTHYA----RNS---INLANSHY-R 1088

  Fly   397 GRKYEHLQVALTEIKGTSAPSGLDRSQDKDQDQESQLSMPGSPSIATLSWLPPKSLDADSIATEG 461
            ..::.|                            |:||   |..::.....||.||      |.|
  Fly  1089 SLRFAH----------------------------SRLS---SSRLSLFMQAPPNSL------TVG 1116

  Fly   462 DEAVDAEYVGISGAEDEFIELPSRDTVESN--MSHVLDRSDHSGGLTKDQVPRISPIVPLTNGRS 524
            :...:..    |.......:|.::...:.|  .:|......||    ...|...|| .|..|..|
  Fly  1117 EGVANTP----SSTATTTTDLTNQQQQQQNQQQTHQSLYIKHS----PKSVSLFSP-NPYVNASS 1172

  Fly   525 LILADDSGNDTDEQCAEPETETAQARKGSKPETERVKDLGDTKTDTDPDPDLDPGQMPTPTNE-A 588
            ...:..:........|.|.......|                       |.|...::.....| |
  Fly  1173 SPASASTSAGAGSSLAPPAAALMHHR-----------------------PSLPVAKLTIRDEEMA 1214

  Fly   589 PVKAASPTAASLRV-----------AWKSLGISLEGTVDV---ECGIEKRPHHYIRSILADGPVG 639
            .|..||.:..|.|.           ..||||.|:.|..|.   ..||      :::::...|...
  Fly  1215 EVIRASMSEGSGRCTPKTITFFKGPGLKSLGFSIVGGRDSPKGNMGI------FVKTVFPSGQAA 1273

  Fly   640 RQGILRPGDELLQVNEHKLQGLRHIEVVKILKEL 673
            ..|.|:.|||::::|.:.:||:.|.|.:.:.|.:
  Fly  1274 DDGTLQAGDEIVEINGNSVQGMSHAETIGLFKNV 1307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 21/57 (37%)
PDZ 307..393 CDD:214570 18/88 (20%)
PDZ_signaling 605..680 CDD:238492 21/72 (29%)
PDZ 773..858 CDD:214570
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492 21/57 (37%)
PDZ_signaling 1230..1317 CDD:238492 21/84 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19964
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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