DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and pdzk1

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001122142.2 Gene:pdzk1 / 337325 ZFINID:ZDB-GENE-031222-1 Length:553 Species:Danio rerio


Alignment Length:524 Identity:96/524 - (18%)
Similarity:182/524 - (34%) Gaps:151/524 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSTEWSQVEVIDLINDGNGLGFILVGGRST----GVVIKALTPGGVAERDGRLQLGDHLLQIGEV 63
            :||..::.::..|....:|.||.|   :||    |:.:..:..||||::.| ::|||.|::|...
Zfish   118 VSTPAAKAKLCYLQKSSSGFGFSL---KSTKGAHGIFMVDVVSGGVADQAG-VKLGDRLVEINSE 178

  Fly    64 NLRGFSSEQVATVLRQTGAQVRLIV----------ARPVEPTAIDYQTLACQAPIIPTKLLSDPE 118
            |:.....:|:...::....::.|::          ::.::| .:.:.|:                
Zfish   179 NVEHLVHDQIVQKVKAASDRLMLLLVDEEADRYFKSKNIQP-GVSHATV---------------- 226

  Fly   119 ELSRHLFQNPSFATAAVAAAAAAAAAAGSG----SD--------GDVGGGGVLDVASLVGLVRGG 171
               :||...|..|.       ....|.|.|    .|        |::..|...:.|.:..:.|..
Zfish   227 ---KHLPHKPRIAD-------MIKRADGYGFMLKEDPKRKGHCIGEIDKGSPAERAGMKDMDRLA 281

  Fly   172 PAEGTELSAVEPQ-------------------------PSAAVLQLQQLSELAGDLADFPLPPIP 211
            ...|.::...:.:                         ....|..|....|:.|.|..:|     
Zfish   282 AVNGEDIENCKHEQVVEKICQGNKCCLLVLDAETDKIYKLGGVSPLLYWEEMRGSLPGYP----- 341

  Fly   212 GGGGHSMVTDSNAGQRPCPRLDLDIVPFSILSPPPRPALQMLPLETQWRCVQDQNRHIETVIADS 276
                     |:.|...|....   .||.::::..|.||....|..|                   
Zfish   342 ---------DNEAVAIPAVAA---AVPAAVVAATPAPAATPAPAAT------------------- 375

  Fly   277 KRKLLANEDGGSASASGSGSPDSYMDSPETETYVVELHKNVYGLGITVAGYVCEEEDLSGIFVKS 341
                       ......:..|......|:    :..|.:...|.|..:.|.    :.:.|..::.
Zfish   376 -----------PTPVPAAAEPADVDHKPK----LCRLERTSAGFGFHLNGI----QGVPGQHIQE 421

  Fly   342 IIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRNT-DIVVHLTLERFLRGRKYEHLQV 405
            :::|.||:.:|.:. :|.:|.|||.::...|:.:.|.|:||: |.:|.|..:|    :.||||:.
Zfish   422 VVKGGAADRAGLVD-DDVVVEVDGVNVEMSTHEEVVNLIRNSGDTLVLLVADR----KAYEHLKA 481

  Fly   406 --------ALTEIKGTSAPSGLDRSQDKDQDQESQLSMPGSPSIATLSWLPPKSLDADSIATEGD 462
                    .|.:......|:......|..:|.|..:..|.:|...|.|.....|..:.|.::..|
Zfish   482 KGIPITPQLLNKEPAADVPAPAYTQVDGRKDTEKDIEKPATPPAPTRSRSSSSSSSSSSSSSASD 546

  Fly   463 EAVD 466
            ::.|
Zfish   547 DSED 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 20/85 (24%)
PDZ 307..393 CDD:214570 22/86 (26%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
pdzk1NP_001122142.2 PDZ_signaling 6..86 CDD:238492
PDZ_signaling 126..204 CDD:238492 21/81 (26%)
PDZ 232..311 CDD:214570 11/85 (13%)
PDZ_signaling 392..471 CDD:238492 23/87 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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