DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15803 and Whrn

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_038965801.1 Gene:Whrn / 313255 RGDID:631330 Length:969 Species:Rattus norvegicus


Alignment Length:1013 Identity:195/1013 - (19%)
Similarity:313/1013 - (30%) Gaps:408/1013 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GLGFILVGG--RSTGVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSSEQVATVLRQTGAQ 83
            ||||.:.||  ...|:.:..:.||.:||::| |::||.:|::.:.:|                  
  Rat   152 GLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSL------------------ 197

  Fly    84 VRLIVARPVEPTAIDYQTLACQAPIIPTKLLSDPEELSRHLFQNPSFATAAVAAAAAAAAAAGSG 148
                                                             |.|..|.|..|..||.
  Rat   198 -------------------------------------------------ARVTHAEAVKALKGSK 213

  Fly   149 SDGDVGGGGVLDVASLVGLVRGGPAEGTELSAVEPQPSAAVLQLQQLSELAGDLADFPLPPIPGG 213
            .       .||.|.| .|.:.||.......:.|:||                             
  Rat   214 K-------LVLSVYS-AGRIPGGYVTNHIYTWVDPQ----------------------------- 241

  Fly   214 GGHSMVTDSNAGQRPCPRLDLDIVPFSILSPPPRPALQMLPLETQWRCVQDQNRHIETVI--ADS 276
             |.|                        .|||     ..||..:..|..:|..|....::  .|.
  Rat   242 -GRS------------------------TSPP-----SSLPHGSTLRQHEDDRRSALHLLQSGDE 276

  Fly   277 KRKLLANEDGGSASASGSGSPDSYMDSPETETYVVELHKNVYGLGITVAGYVCEEEDLSGIFVKS 341
            |:..|...||.|...:..|..:                   |||||.:.|               
  Rat   277 KKVNLVLGDGRSLGLTIRGGAE-------------------YGLGIYITG--------------- 307

  Fly   342 IIEGSAAETSGQIQINDRIVAVDGRSLSGVTNHQAVELLRNTDIVVHLTLERFLRGRKYEHLQVA 406
            :..||.||:|| :::.|:|:.|:|||...:.:.:||:||:::.   ||.|.....|| ..|.:..
  Rat   308 VDPGSEAESSG-LKVGDQILEVNGRSFLSILHDEAVKLLKSSR---HLILTVKDVGR-LPHARTT 367

  Fly   407 LTEIK-------GTSAPSGLDRSQDKDQDQESQLSMPG-----SPSIATLSWLPPKS---LD--A 454
            :.:.|       |.|..:......|..::..::   ||     :.|..|||.|..::   ||  |
  Rat   368 VDQTKWIASSRIGESITNSAGFPGDLTEEGTNK---PGFYKGPAGSQVTLSSLGNQTRALLDDQA 429

  Fly   455 DSIATEGDEAVDAEY--------VGISGAEDEFIELPSRDTVESNMSHV--------LDRSDHSG 503
            ..:.||.:.|....|        :.:........||.:.....|.:|.|        |||.||. 
  Rat   430 RHLLTEQERATMMYYLDQYRGGTISVEALVMALFELLNTHAKFSLLSEVRGIISPQDLDRFDHL- 493

  Fly   504 GLTKDQVPRISPIVPLTNG----RSLILADDSGNDTDEQCA------------------------ 540
             :.:.::..:....|...|    .|::...|:|:.|.....                        
  Rat   494 -VLRREIESMKARQPPGPGVGDTYSMVSYSDTGSSTGSHGTSTTVSSARERLLWLIDLMENTLDL 557

  Fly   541 EPETETAQARKGSKPETERVKD---------------------------LGDT----KTDTDP-- 572
            |...||.|....:.|:.. |.|                           ||.|    :.|:.|  
  Rat   558 EGTGETTQGSTNALPDVS-VDDVRSPSEDLPGIKPPPPPPPLAQGHDRLLGQTRKPVREDSAPLS 621

  Fly   573 ---------------DPDLDPGQMPTPT---NEAPVKAASPTAASLRVAWKS--------LGISL 611
                           .|...||..||||   :.|....:||..||:..|..|        |.:..
  Rat   622 SAAHSGIVFSAPRNRSPPPPPGIAPTPTPGPSSARDSPSSPIYASISHANPSSRKPLDTHLALVN 686

  Fly   612 EGTVDVECGIEKRPHHYIRSILADGPVGRQGILRPGDELLQVNEH--KLQGLRHIEVVKILKELP 674
            :..:.....::..||  ::|..|:.|....|:..|..     :||  .:...:|..:|::     
  Rat   687 QHPIGPFPRVQSPPH--LKSPPAEAPGAGAGLPPPSP-----SEHADAVGANQHFVLVEV----- 739

  Fly   675 ARVKLVCARGTHVPSVINTSQNPEAFETRSLLPGGHQSLQNLLSKAQSESSLYTSSTATLT-DAG 738
                       |.|     ...|:..|.|:|..          ::..|..|..:.|..||: |:|
  Rat   740 -----------HRP-----DSEPDVNEVRALPQ----------TRTASTLSQLSDSGQTLSEDSG 778

  Fly   739 AAAGGS-GGTAGGGARSKSLENVSGLALWSCE----------------VTAVDIEKTEQGFGFSI 786
            ..||.: ..|:|.|.::.:.:|.:|..|...|                .|.:.:.|:....|.:|
  Rat   779 VDAGETEASTSGRGRQTANTKNKNGKELPQTERTTEGANKPPGLLEPTSTLIRVRKSAATLGIAI 843

  Fly   787 -------------------LDYQD--PLDSEGSVIV----IRGL--------------------- 805
                               |..:|  |.|..|...:    :.||                     
  Rat   844 EGGANTRQPLPRIVTIQICLPRRDTEPRDRHGQAPLHAPTLPGLWTRDWQHPARYPRDPCLCLPV 908

  Fly   806 IRGGAAEATNEIYPGDRLMSVGDRLLQGLELDEAVSIL 843
            .|||:|....::..|..::.|..:.|:|.|..||..::
  Rat   909 QRGGSAHNCGQLKVGHVILEVNGQTLRGKEHREAARVI 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 17/69 (25%)
PDZ 307..393 CDD:214570 25/85 (29%)
PDZ_signaling 605..680 CDD:238492 13/84 (15%)
PDZ 773..858 CDD:214570 21/117 (18%)
WhrnXP_038965801.1 HN_L-whirlin_R1_like 38..113 CDD:259822
PDZ_signaling 139..216 CDD:238492 24/138 (17%)
PDZ_signaling 276..356 CDD:238492 31/117 (26%)
HN_L-whirlin_R2_like 418..498 CDD:259823 17/81 (21%)
PDZ_signaling <908..949 CDD:238492 11/39 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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