DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15803 and Synj2bp

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_079568.1 Gene:Synj2bp / 24071 MGIID:1344347 Length:145 Species:Mus musculus


Alignment Length:114 Identity:35/114 - (30%)
Similarity:55/114 - (48%) Gaps:14/114 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 VELHKNVYGLGITVAG-----YVCEEEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSG 370
            :.|.:...|||..:.|     ||..:   |||:|..|.|..||...|::|..|:|::|:|:.|..
Mouse    14 INLTRGPSGLGFNIVGGTDQQYVSND---SGIYVSRIKEDGAAAQDGRLQEGDKILSVNGQDLKN 75

  Fly   371 VTNHQAVELLRNTDIVVHLTLERFLRGRKYEHLQVALTEIKGTSAPSGL 419
            :.:..||:|.||....|.|.::..|      .:|......:|...|||:
Mouse    76 LLHQDAVDLFRNAGCAVSLRVQHRL------PVQNGPIVHRGEGEPSGV 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492
PDZ 307..393 CDD:214570 29/86 (34%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
Synj2bpNP_079568.1 PDZ_signaling 13..97 CDD:238492 29/85 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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