DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and LNX2

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_699202.1 Gene:LNX2 / 222484 HGNCID:20421 Length:690 Species:Homo sapiens


Alignment Length:431 Identity:93/431 - (21%)
Similarity:148/431 - (34%) Gaps:150/431 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NDGNGLGFILVGGRST---GVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSSEQVATVLR 78
            :.|..||..||  |.|   ||.|..|..||:|.:||||...|.:|.|...:|:..:.|..|.:::
Human   346 DSGEQLGIKLV--RRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQ 408

  Fly    79 QTGAQVRLIVARPVEP-------------------TAIDY-----------QTLACQAPIIPTKL 113
            .:|.:|.|.:|||.:|                   |...|           |.:.||...|..| 
Human   409 ASGERVNLTIARPGKPQPGNTIREAGNHSSSSQHHTPPPYYSRPSSHKDLTQCVTCQEKHITVK- 472

  Fly   114 LSDPEELSRHLFQNPSFATAAVAAAAAAAAAAGSGS--------------------DGDVGGGGV 158
             .:|.|                  :.....|.|.||                    ||.:..|.|
Human   473 -KEPHE------------------SLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDV 518

  Fly   159 LDVASLVGLVRGGPAEGTELSAVEPQPSAAVLQLQQLSELAGDLADFPLPPIPGGGGHSMVTDSN 223
                 |:.:      .|.:|:.:....:.|:|:....|                           
Human   519 -----LLNI------NGIDLTNLSHSEAVAMLKASAAS--------------------------- 545

  Fly   224 AGQRPCPRLDLDIVPFSILSPPPRPALQMLPLETQWRCVQDQNRHIETVIADSKRKLLANEDGGS 288
                                    ||:.:..||.|  .|::..::.|    :.......||    
Human   546 ------------------------PAVALKALEVQ--IVEEATQNAE----EQPSTFSENE---- 576

  Fly   289 ASASGSGSPDSYMDSPET--ETYVVELHKNVYG-LGITVAGYVCEEEDLSGIFVKSIIEGSAAET 350
            ..||.|.|...::..|.|  ..:.:.|.::..| .|.::.|...|.......|:|:|:.|:.|..
Human   577 YDASWSPSWVMWLGLPSTLHSCHDIVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYY 641

  Fly   351 SGQIQINDRIVAVDGRSLSGVTNHQAVELLRNTDIVVHLTL 391
            .|:::..|.||||:|.|..|:::...|.:|:.....|.||:
Human   642 DGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVTLTV 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 27/74 (36%)
PDZ 307..393 CDD:214570 24/86 (28%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
LNX2NP_699202.1 mRING-HC-C3HC3D_LNX2 45..89 CDD:319694
modified RING-HC finger (C3HC3D-type) 50..87 CDD:319694
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..224
NPXY motif 208..211
PDZ 230..316 CDD:214570
PDZ 336..422 CDD:214570 29/77 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 418..455 6/36 (17%)
PDZ_signaling 466..542 CDD:238492 17/106 (16%)
PDZ_signaling 599..683 CDD:238492 24/84 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.000

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